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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74378 Canola cytosol 62.63 43.21
CDX91854 Canola cytosol 63.64 42.42
CDY07146 Canola cytosol 54.04 36.27
CDY51713 Canola cytosol 53.54 35.93
CDY07196 Canola cytosol 51.52 34.34
CDY48522 Canola cytosol 42.42 30.11
CDX99123 Canola cytosol 23.23 23.96
CDX79503 Canola cytosol 32.83 21.31
CDX84705 Canola cytosol 32.32 20.91
CDY12160 Canola cytosol 30.81 19.61
CDY28571 Canola cytosol 22.22 19.47
CDY23783 Canola cytosol 28.28 18.18
CDY60616 Canola cytosol, mitochondrion, plastid 25.76 17.71
CDX86065 Canola cytosol 24.24 15.24
CDY70349 Canola cytosol 20.2 15.15
CDY28575 Canola golgi 23.23 15.08
CDY44083 Canola cytosol 23.74 14.92
CDX82371 Canola cytosol 23.23 14.89
CDX75913 Canola cytosol 23.23 14.89
CDY04290 Canola extracellular 19.19 14.79
CDY05531 Canola cytosol 21.72 14.38
CDY04283 Canola plastid 22.73 14.11
CDY05324 Canola cytosol 21.21 14.0
CDY07338 Canola plastid 21.21 13.91
CDY50084 Canola extracellular, vacuole 26.77 13.87
CDY70520 Canola vacuole 23.23 13.86
CDY07340 Canola plastid 22.22 13.79
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 25.76 13.75
CDY43081 Canola extracellular, vacuole 26.26 13.61
CDY36040 Canola extracellular 25.25 13.23
CDX83143 Canola cytosol 21.21 13.12
CDX74582 Canola extracellular, golgi, plastid 24.75 13.1
CDX81956 Canola extracellular 20.2 13.03
CDY58708 Canola cytosol, nucleus, plastid 20.2 12.99
CDY36041 Canola plasma membrane 23.23 12.92
CDY25415 Canola vacuole 26.26 12.87
CDX87054 Canola extracellular 22.73 12.86
CDY19775 Canola extracellular 22.73 12.86
CDX87056 Canola extracellular 22.22 12.83
KRH68153 Soybean cytosol 20.2 12.82
CDX82252 Canola plastid 23.23 12.81
CDY19777 Canola extracellular 22.22 12.79
CDX82251 Canola extracellular, golgi 25.76 12.78
CDX82246 Canola endoplasmic reticulum, extracellular 24.24 12.73
CDY19776 Canola extracellular, plasma membrane, vacuole 22.22 12.72
CDX87055 Canola golgi, plasma membrane 21.21 12.61
CDX80557 Canola extracellular 22.22 12.57
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 22.22 12.57
CDY39500 Canola cytosol 20.2 12.5
CDY29822 Canola vacuole 25.25 12.41
CDY50083 Canola endoplasmic reticulum, vacuole 23.74 12.34
CDY43080 Canola endoplasmic reticulum, vacuole 23.74 12.34
CDX95908 Canola plastid 22.73 12.3
CDX88229 Canola extracellular 21.72 12.29
CDY67361 Canola vacuole 21.72 12.29
CDX82249 Canola plasma membrane, vacuole 23.74 12.27
CDY24977 Canola extracellular 21.72 12.25
CDY05532 Canola extracellular 21.72 12.25
CDY50282 Canola endoplasmic reticulum, vacuole 23.23 11.95
CDY39666 Canola endoplasmic reticulum, vacuole 19.7 11.82
CDY57407 Canola cytosol 18.18 11.61
CDX81648 Canola plastid 16.67 11.54
CDY04288 Canola cytosol 8.08 11.43
CDY34004 Canola cytosol 17.17 11.33
CDX82248 Canola endoplasmic reticulum, vacuole 24.24 10.91
CDY44084 Canola cytosol 22.22 10.43
CDY46265 Canola plasma membrane 24.75 10.43
CDY29329 Canola plasma membrane 24.24 10.19
CDY19307 Canola cytosol 18.69 9.54
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 19.7 7.59
CDY37377 Canola cytosol, plastid 17.68 7.14
CDY70350 Canola plastid 5.56 6.43
CDY36039 Canola vacuole 23.74 5.1
Protein Annotations
EnsemblPlants:CDX91855EnsemblPlantsGene:GSBRNA2T00153472001Gene3D:2.60.210.10GO:A0A078DRA9GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likePANTHER:PTHR26379
PANTHER:PTHR26379:SF213PFAM:PF00917PFscan:PS50144ProteinID:CDX91855ProteinID:CDX91855.1SMART:SM00061
SUPFAM:SSF49599TMHMM:TMhelixUniParc:UPI0004EDF66DMapMan:35.2::
Description
BnaC03g31570D
Coordinates
chrLK031870:+:417106..417941
Molecular Weight (calculated)
22415.2 Da
IEP (calculated)
6.502
GRAVY (calculated)
0.040
Length
198 amino acids
Sequence
(BLAST)
001: MAIKRSLLSL PCLYLCVYIF WSMMLMCGLF AGAMALPPEL SWKGDSDLVS GFFGVEPAPS GTAECFSVTE KPLNHKITWM MTRFSSFEPE KAHNSNEFVV
101: GNRKWAKIKS LSVYLVGNGF VNNALKANVF TKFKLRVLDQ VNRDHVEKPY SCWLGEEPDV SHGFPEFMPL KTLDEPYLVN DKFYVGVEFE LISVTNTC
Best Arabidopsis Sequence Match ( AT4G00780.1 )
(BLAST)
001: MSRPIPIEEM VRLFKIRHTT SHLFKIDNFS LLKKHGIEKV ESSVFDLAGH KWKLSVYPNG HKNAKGTHVS MFLVNQVPVN DMPTYELLVV SQLERKWHTH
101: GRDEFDINPE PASEGFLRFI SLADLERKGF LIGDCCMFGV KFHGIEPANP GTAECFSLIE KPLNHKVTWM MSKFSSFNPG KAHQSNEFVV GTRKWRLEVH
201: PRGYMDEKDK SFSVYLSAEG FVNNAPMTKT YAKFKLRVLD QVSWNHVEES GLSWFDAEPS DQSGFADFMP LGKLNEPYLV KDKLYVGVEF EVVSTTYYC
Arabidopsis Description
TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ38]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.