Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82251 | Canola | extracellular, golgi | 81.2 | 77.94 |
| CDY36040 | Canola | extracellular | 71.02 | 71.96 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 71.54 | 71.17 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 63.71 | 64.04 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 63.71 | 64.04 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 62.14 | 62.8 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 61.36 | 62.33 |
| CDY43081 | Canola | extracellular, vacuole | 61.36 | 61.52 |
| CDY50084 | Canola | extracellular, vacuole | 60.05 | 60.21 |
| CDY29822 | Canola | vacuole | 62.14 | 59.06 |
| CDY25415 | Canola | vacuole | 60.84 | 57.67 |
| CDX82252 | Canola | plastid | 52.22 | 55.71 |
| CDX83143 | Canola | cytosol | 45.95 | 55.0 |
| CDY36041 | Canola | plasma membrane | 50.91 | 54.78 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 62.92 | 54.77 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 48.3 | 49.33 |
| CDY34004 | Canola | cytosol | 36.55 | 46.67 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 39.69 | 46.06 |
| CDY04288 | Canola | cytosol | 16.45 | 45.0 |
| CDY70350 | Canola | plastid | 19.58 | 43.86 |
| CDY44083 | Canola | cytosol | 34.73 | 42.22 |
| CDY70349 | Canola | cytosol | 28.98 | 42.05 |
| CDY36039 | Canola | vacuole | 97.65 | 40.61 |
| CDY28571 | Canola | cytosol | 23.24 | 39.38 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 31.59 | 39.29 |
| CDX99123 | Canola | cytosol | 19.58 | 39.06 |
| CDY28575 | Canola | golgi | 30.03 | 37.7 |
| CDY07338 | Canola | plastid | 29.5 | 37.42 |
| CDY04290 | Canola | extracellular | 25.07 | 37.35 |
| CDY39500 | Canola | cytosol | 30.55 | 36.56 |
| CDY07340 | Canola | plastid | 30.29 | 36.36 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.56 | 36.19 |
| CDY04283 | Canola | plastid | 30.03 | 36.05 |
| CDY57407 | Canola | cytosol | 28.98 | 35.81 |
| CDX81648 | Canola | plastid | 26.37 | 35.31 |
| CDX74582 | Canola | extracellular, golgi, plastid | 34.2 | 35.03 |
| CDX95908 | Canola | plastid | 33.42 | 34.97 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 32.38 | 33.42 |
| CDX87055 | Canola | golgi, plasma membrane | 28.2 | 32.43 |
| CDX82371 | Canola | cytosol | 26.11 | 32.36 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 28.98 | 32.08 |
| CDX75913 | Canola | cytosol | 25.07 | 31.07 |
| CDX86065 | Canola | cytosol | 25.33 | 30.79 |
| CDY19775 | Canola | extracellular | 27.94 | 30.57 |
| CDX87054 | Canola | extracellular | 27.94 | 30.57 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.68 | 30.29 |
| CDX80557 | Canola | extracellular | 27.42 | 30.0 |
| CDY05532 | Canola | extracellular | 27.42 | 29.91 |
| CDY24977 | Canola | extracellular | 27.42 | 29.91 |
| CDY19307 | Canola | cytosol | 30.29 | 29.9 |
| CDX87056 | Canola | extracellular | 26.63 | 29.74 |
| CDY67361 | Canola | vacuole | 27.15 | 29.71 |
| CDY19777 | Canola | extracellular | 26.63 | 29.65 |
| CDY44084 | Canola | cytosol | 32.38 | 29.38 |
| CDX88229 | Canola | extracellular | 26.63 | 29.14 |
| CDY05531 | Canola | cytosol | 22.45 | 28.76 |
| CDY05324 | Canola | cytosol | 22.19 | 28.33 |
| CDY70520 | Canola | vacuole | 24.54 | 28.31 |
| KRH68153 | Soybean | cytosol | 22.98 | 28.21 |
| CDY46265 | Canola | plasma membrane | 33.42 | 27.23 |
| CDX74378 | Canola | cytosol | 20.37 | 27.18 |
| CDY29329 | Canola | plasma membrane | 33.42 | 27.18 |
| CDX91854 | Canola | cytosol | 20.89 | 26.94 |
| CDX81956 | Canola | extracellular | 21.15 | 26.38 |
| CDY07146 | Canola | cytosol | 19.32 | 25.08 |
| CDY51713 | Canola | cytosol | 18.8 | 24.41 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.27 | 23.74 |
| CDX79503 | Canola | cytosol | 18.54 | 23.28 |
| CDY07196 | Canola | cytosol | 17.75 | 22.9 |
| CDY37377 | Canola | cytosol, plastid | 28.98 | 22.65 |
| CDX84705 | Canola | cytosol | 17.75 | 22.22 |
| CDY23783 | Canola | cytosol | 17.75 | 22.08 |
| CDY48522 | Canola | cytosol | 15.93 | 21.86 |
| CDY12160 | Canola | cytosol | 16.97 | 20.9 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 14.1 | 18.75 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | EnsemblPlants:CDX82249 | ProteinID:CDX82249 | ProteinID:CDX82249.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00137351001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| PFAM:PF00917 | PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 | SMART:SM00061 | SUPFAM:SSF49599 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:TRAF-like | UniParc:UPI0004EE6FE3 | : | : |
Description
BnaA03g35720D
Coordinates
chrLK031828:-:218406..220323
Molecular Weight (calculated)
44259.4 Da
IEP (calculated)
7.143
GRAVY (calculated)
-0.334
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSHYTNIIY VVFLLFCLLI TSSSAQSLIR QPTDDLSTIL QQKNGAQPNS ILGEAHYLNK DDLEIYSRDY KGSPSNLVTG MRDRPPMSYS LRMESFNTLL
101: QSNETERYES RPFPVGGYNW SLIVYPNGNR QDSGSGFISL YLAIDNSTLV SSHQEVFADL RFYVFKRTER NFFTVQDTDV WRYNIFKTMW GFPRVLPLDT
201: FRNPSNGYLF NGDNCEFGVD VTVHSPFESS ELFTVARNFP NPRFTWTIQR FSTLVGDTHL SNTFSVGGRN WNIQVNPRGR STGAGRAMSM YLILNANEKV
301: RPNEKIYVRA RLRVINQRIF SLLWTTIERP IDHWFTTPGL GWGYDEFISL DDLRDFWKGY VMGDVLIVEV EMEAISSTKY FPS
101: QSNETERYES RPFPVGGYNW SLIVYPNGNR QDSGSGFISL YLAIDNSTLV SSHQEVFADL RFYVFKRTER NFFTVQDTDV WRYNIFKTMW GFPRVLPLDT
201: FRNPSNGYLF NGDNCEFGVD VTVHSPFESS ELFTVARNFP NPRFTWTIQR FSTLVGDTHL SNTFSVGGRN WNIQVNPRGR STGAGRAMSM YLILNANEKV
301: RPNEKIYVRA RLRVINQRIF SLLWTTIERP IDHWFTTPGL GWGYDEFISL DDLRDFWKGY VMGDVLIVEV EMEAISSTKY FPS
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.