Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036573.1-P | Field mustard | extracellular | 98.57 | 98.57 |
| CDX87054 | Canola | extracellular | 98.57 | 98.57 |
| CDY67361 | Canola | vacuole | 86.86 | 86.86 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 86.57 | 86.57 |
| CDY70520 | Canola | vacuole | 82.0 | 86.45 |
| CDX80557 | Canola | extracellular | 86.0 | 86.0 |
| CDX88229 | Canola | extracellular | 86.0 | 86.0 |
| CDY05532 | Canola | extracellular | 85.43 | 85.19 |
| CDY24977 | Canola | extracellular | 85.14 | 84.9 |
| CDX81956 | Canola | extracellular | 72.0 | 82.08 |
| CDY05531 | Canola | cytosol | 68.0 | 79.6 |
| CDY05324 | Canola | cytosol | 64.86 | 75.67 |
| AT5G26320.1 | Thale cress | vacuole | 70.57 | 70.17 |
| CDY19777 | Canola | extracellular | 68.0 | 69.19 |
| CDX87056 | Canola | extracellular | 67.43 | 68.8 |
| CDX87055 | Canola | golgi, plasma membrane | 64.29 | 67.57 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 65.43 | 66.19 |
| CDY04288 | Canola | cytosol | 13.71 | 34.29 |
| CDY70350 | Canola | plastid | 15.43 | 31.58 |
| KRH68153 | Soybean | cytosol | 26.86 | 30.13 |
| CDX99123 | Canola | cytosol | 16.29 | 29.69 |
| CDY44083 | Canola | cytosol | 26.57 | 29.52 |
| CDY50084 | Canola | extracellular, vacuole | 32.0 | 29.32 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 31.43 | 29.18 |
| CDY70349 | Canola | cytosol | 22.0 | 29.17 |
| CDY43081 | Canola | extracellular, vacuole | 31.71 | 29.06 |
| CDX75913 | Canola | cytosol | 25.14 | 28.48 |
| CDX82371 | Canola | cytosol | 25.14 | 28.48 |
| CDX82252 | Canola | plastid | 29.14 | 28.41 |
| CDY36041 | Canola | plasma membrane | 28.86 | 28.37 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 30.57 | 28.08 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 30.57 | 28.08 |
| CDY04290 | Canola | extracellular | 20.57 | 28.02 |
| CDX82249 | Canola | plasma membrane, vacuole | 30.57 | 27.94 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 24.57 | 27.92 |
| CDX83143 | Canola | cytosol | 25.43 | 27.81 |
| CDX82251 | Canola | extracellular, golgi | 30.86 | 27.07 |
| CDY07146 | Canola | cytosol | 22.57 | 26.78 |
| CDY36040 | Canola | extracellular | 28.86 | 26.72 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 29.14 | 26.49 |
| CDY07338 | Canola | plastid | 22.57 | 26.16 |
| CDY25415 | Canola | vacuole | 30.0 | 25.99 |
| CDY28575 | Canola | golgi | 22.57 | 25.9 |
| CDY29822 | Canola | vacuole | 29.71 | 25.81 |
| CDY51713 | Canola | cytosol | 21.71 | 25.76 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 32.29 | 25.68 |
| CDY39500 | Canola | cytosol | 23.43 | 25.62 |
| CDY57407 | Canola | cytosol | 22.57 | 25.48 |
| CDY23783 | Canola | cytosol | 22.29 | 25.32 |
| CDX91854 | Canola | cytosol | 21.43 | 25.25 |
| CDY28571 | Canola | cytosol | 16.29 | 25.22 |
| CDX74378 | Canola | cytosol | 20.57 | 25.09 |
| CDY12160 | Canola | cytosol | 22.29 | 25.08 |
| CDY04283 | Canola | plastid | 22.86 | 25.08 |
| CDX95908 | Canola | plastid | 26.0 | 24.86 |
| CDY07340 | Canola | plastid | 22.57 | 24.76 |
| CDX81648 | Canola | plastid | 19.71 | 24.13 |
| CDX84705 | Canola | cytosol | 20.86 | 23.86 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 19.43 | 23.61 |
| CDX79503 | Canola | cytosol | 20.57 | 23.61 |
| CDY34004 | Canola | cytosol | 19.71 | 23.0 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.86 | 22.73 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 24.0 | 22.64 |
| CDX74582 | Canola | extracellular, golgi, plastid | 24.0 | 22.46 |
| CDY07196 | Canola | cytosol | 18.57 | 21.89 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 20.0 | 21.21 |
| CDY44084 | Canola | cytosol | 25.43 | 21.09 |
| CDX86065 | Canola | cytosol | 18.86 | 20.95 |
| CDY19307 | Canola | cytosol | 22.86 | 20.62 |
| CDY48522 | Canola | cytosol | 16.0 | 20.07 |
| CDY46265 | Canola | plasma membrane | 24.29 | 18.09 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.29 | 17.9 |
| CDY29329 | Canola | plasma membrane | 23.71 | 17.62 |
| CDY37377 | Canola | cytosol, plastid | 23.43 | 16.73 |
| CDY36039 | Canola | vacuole | 30.86 | 11.73 |
Protein Annotations
| EnsemblPlants:CDY19775 | EnsemblPlantsGene:GSBRNA2T00009522001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF214 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY19775 | ProteinID:CDY19775.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI0004EEF652 | UniProt:A0A078FZM0 | MapMan:35.2 | : | : |
Description
BnaA09g04280DBnaA09g04280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZM0]
Coordinates
chrLK032100:-:309032..311139
Molecular Weight (calculated)
39601.9 Da
IEP (calculated)
8.532
GRAVY (calculated)
-0.271
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHKRSLGF ISLAFLFITC SSAEFLIQQV TEGKGTENNS SYNVEANLGE TRAFREERPS SKIVTIAGYS VIKGRFEPYE SSVFEAAGYR WRLVLYVIGN
101: KNDGGAGHIS LYVRMEETDS LPYGWEVNVD LKLFVHNPKT HKYLTVTDGT VKRYNAAKKE WGFGKLISLS IFENTNNGYI VQDTCSFGAE IHIVKPAEIQ
201: EKVTFISNPP NNVFTWKILR FSSLEDKFYY SADFLVGDRY WRLGFNPKGD GDGRPHALPL FLFAQGFKEN TVATNTWGAV NLRLKNQRNS NHRQLYSAAW
301: YPIRSDYGVG VNNIILLSDL KDPSKGYLVN DAIIFEAEMV KFSVTNIVPV
101: KNDGGAGHIS LYVRMEETDS LPYGWEVNVD LKLFVHNPKT HKYLTVTDGT VKRYNAAKKE WGFGKLISLS IFENTNNGYI VQDTCSFGAE IHIVKPAEIQ
201: EKVTFISNPP NNVFTWKILR FSSLEDKFYY SADFLVGDRY WRLGFNPKGD GDGRPHALPL FLFAQGFKEN TVATNTWGAV NLRLKNQRNS NHRQLYSAAW
301: YPIRSDYGVG VNNIILLSDL KDPSKGYLVN DAIIFEAEMV KFSVTNIVPV
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.