Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 77.27 | 90.19 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 65.0 | 75.07 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 64.32 | 74.28 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 63.86 | 74.14 |
| CDY43081 | Canola | extracellular, vacuole | 59.55 | 68.59 |
| CDY50084 | Canola | extracellular, vacuole | 59.55 | 68.59 |
| CDY29822 | Canola | vacuole | 59.55 | 65.01 |
| CDX83143 | Canola | cytosol | 46.59 | 64.06 |
| CDY25415 | Canola | vacuole | 58.18 | 63.37 |
| CDX82249 | Canola | plasma membrane, vacuole | 54.77 | 62.92 |
| CDX82251 | Canola | extracellular, golgi | 55.68 | 61.4 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 52.73 | 60.26 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 50.45 | 59.2 |
| CDX82252 | Canola | plastid | 48.18 | 59.05 |
| CDY36041 | Canola | plasma membrane | 47.5 | 58.71 |
| CDY36040 | Canola | extracellular | 47.95 | 55.82 |
| CDY34004 | Canola | cytosol | 36.14 | 53.0 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 38.86 | 51.82 |
| CDY70350 | Canola | plastid | 18.18 | 46.78 |
| CDY70349 | Canola | cytosol | 27.73 | 46.21 |
| Bra001787.1-P | Field mustard | endoplasmic reticulum | 97.5 | 46.13 |
| CDY44083 | Canola | cytosol | 31.59 | 44.13 |
| CDX99123 | Canola | cytosol | 19.09 | 43.75 |
| CDY04288 | Canola | cytosol | 13.86 | 43.57 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 49.32 | 42.22 |
| CDY07338 | Canola | plastid | 28.18 | 41.06 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 28.18 | 40.26 |
| CDY04290 | Canola | extracellular | 23.41 | 40.08 |
| CDY57407 | Canola | cytosol | 28.18 | 40.0 |
| CDX95908 | Canola | plastid | 32.5 | 39.07 |
| CDY28575 | Canola | golgi | 26.59 | 38.36 |
| CDY07340 | Canola | plastid | 27.73 | 38.24 |
| CDY04283 | Canola | plastid | 27.73 | 38.24 |
| CDY28571 | Canola | cytosol | 19.55 | 38.05 |
| CDX81648 | Canola | plastid | 23.86 | 36.71 |
| CDX74582 | Canola | extracellular, golgi, plastid | 31.14 | 36.63 |
| CDY39500 | Canola | cytosol | 26.59 | 36.56 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 30.45 | 36.12 |
| CDX86065 | Canola | cytosol | 24.09 | 33.65 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.59 | 33.43 |
| CDX82371 | Canola | cytosol | 23.41 | 33.33 |
| CDX80557 | Canola | extracellular | 26.14 | 32.86 |
| CDY67361 | Canola | vacuole | 26.14 | 32.86 |
| CDY05532 | Canola | extracellular | 26.14 | 32.76 |
| CDY24977 | Canola | extracellular | 26.14 | 32.76 |
| CDX87054 | Canola | extracellular | 25.91 | 32.57 |
| KRH68153 | Soybean | cytosol | 22.95 | 32.37 |
| CDY19775 | Canola | extracellular | 25.68 | 32.29 |
| CDX88229 | Canola | extracellular | 25.68 | 32.29 |
| CDX87055 | Canola | golgi, plasma membrane | 24.09 | 31.83 |
| CDX75913 | Canola | cytosol | 22.27 | 31.72 |
| CDY44084 | Canola | cytosol | 30.0 | 31.28 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 24.55 | 31.21 |
| CDY05531 | Canola | cytosol | 21.14 | 31.1 |
| CDY70520 | Canola | vacuole | 23.41 | 31.02 |
| CDY19307 | Canola | cytosol | 27.27 | 30.93 |
| CDY05324 | Canola | cytosol | 20.91 | 30.67 |
| CDX87056 | Canola | extracellular | 23.41 | 30.03 |
| CDY19777 | Canola | extracellular | 23.41 | 29.94 |
| CDY29329 | Canola | plasma membrane | 32.05 | 29.94 |
| CDY46265 | Canola | plasma membrane | 31.82 | 29.79 |
| CDX81956 | Canola | extracellular | 20.0 | 28.66 |
| CDY07146 | Canola | cytosol | 18.41 | 27.46 |
| CDX74378 | Canola | cytosol | 17.73 | 27.18 |
| CDY36039 | Canola | vacuole | 56.59 | 27.04 |
| CDX91854 | Canola | cytosol | 18.18 | 26.94 |
| CDY51713 | Canola | cytosol | 17.5 | 26.1 |
| CDY37377 | Canola | cytosol, plastid | 27.5 | 24.69 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 10.91 | 24.24 |
| CDY07196 | Canola | cytosol | 15.23 | 22.56 |
| CDY12160 | Canola | cytosol | 15.91 | 22.51 |
| CDX79503 | Canola | cytosol | 15.45 | 22.3 |
| CDX84705 | Canola | cytosol | 15.45 | 22.22 |
| CDY48522 | Canola | cytosol | 13.64 | 21.51 |
| CDY23783 | Canola | cytosol | 14.77 | 21.1 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 13.18 | 20.14 |
Protein Annotations
| EnsemblPlants:CDX82248 | EnsemblPlantsGene:GSBRNA2T00137350001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDX82248 | ProteinID:CDX82248.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EEDF9B | MapMan:35.2 | : | : |
Description
BnaA03g35730D
Coordinates
chrLK031828:-:208135..217745
Molecular Weight (calculated)
50588.6 Da
IEP (calculated)
8.445
GRAVY (calculated)
-0.366
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSHYRKTIS IVSLLFCLFI TSASARSFIR QYTDDFNTNL QQENGAGPNP NLGEANYEDK YQEISSRDYK VSASNAVKGL RDRPPSSYIL KMESFNTLLK
101: SNYAERYESR PFAVGGYNWT LVVYPNGNKK DSGSGYLSLY VAIDNSTLVG AQQEVLADLR FYVFNNNERK YFTIQDTTVR RFNVFKTMWG FSQVLPVDTF
201: KDTKNGYLYD GDHCEFGVDV IIPSIAENSE LFSVTEKFFN PTSTWTIRGF STLLKDSYLS DVFSIGGRNW NIQVYPNGRG SGEGMFMSMF LNLNEKEKLR
301: PYEKVYVRAK LRVLNQRKLN NVQRQLDSWY NRAVASWGFN QFISFDDLRD SSKGFLVNDV LMVQVEMEAV SSTKSLIVYP NGYRQDSGSG FISLYVAINN
401: STLVEAHQEV FADLRFYVFK NNERKYFTIQ EVTSIYISML
101: SNYAERYESR PFAVGGYNWT LVVYPNGNKK DSGSGYLSLY VAIDNSTLVG AQQEVLADLR FYVFNNNERK YFTIQDTTVR RFNVFKTMWG FSQVLPVDTF
201: KDTKNGYLYD GDHCEFGVDV IIPSIAENSE LFSVTEKFFN PTSTWTIRGF STLLKDSYLS DVFSIGGRNW NIQVYPNGRG SGEGMFMSMF LNLNEKEKLR
301: PYEKVYVRAK LRVLNQRKLN NVQRQLDSWY NRAVASWGFN QFISFDDLRD SSKGFLVNDV LMVQVEMEAV SSTKSLIVYP NGYRQDSGSG FISLYVAINN
401: STLVEAHQEV FADLRFYVFK NNERKYFTIQ EVTSIYISML
001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
Arabidopsis Description
AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.