Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001785.1-P | Field mustard | nucleus | 78.55 | 100.0 |
| CDY36041 | Canola | plasma membrane | 96.66 | 97.47 |
| AT3G20360.1 | Thale cress | endoplasmic reticulum, extracellular | 79.11 | 78.24 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 59.61 | 56.76 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 58.77 | 55.38 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 58.22 | 54.86 |
| CDX83143 | Canola | cytosol | 48.47 | 54.38 |
| CDX82249 | Canola | plasma membrane, vacuole | 55.71 | 52.22 |
| CDY50084 | Canola | extracellular, vacuole | 55.15 | 51.83 |
| CDY43081 | Canola | extracellular, vacuole | 54.87 | 51.57 |
| CDX82251 | Canola | extracellular, golgi | 56.82 | 51.13 |
| CDY29822 | Canola | vacuole | 57.38 | 51.12 |
| CDY25415 | Canola | vacuole | 56.27 | 50.0 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 59.05 | 48.18 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 51.25 | 47.79 |
| CDY34004 | Canola | cytosol | 36.77 | 44.0 |
| CDY36040 | Canola | extracellular | 45.96 | 43.65 |
| CDY70350 | Canola | plastid | 20.61 | 43.27 |
| CDY04288 | Canola | cytosol | 16.43 | 42.14 |
| CDY57407 | Canola | cytosol | 34.82 | 40.32 |
| CDY70349 | Canola | cytosol | 29.53 | 40.15 |
| CDY44083 | Canola | cytosol | 35.1 | 40.0 |
| CDY07338 | Canola | plastid | 33.43 | 39.74 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 33.7 | 39.29 |
| CDY04283 | Canola | plastid | 34.54 | 38.87 |
| CDY07340 | Canola | plastid | 34.26 | 38.56 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 34.82 | 37.88 |
| CDY04290 | Canola | extracellular | 26.74 | 37.35 |
| CDY28571 | Canola | cytosol | 23.12 | 36.73 |
| CDY28575 | Canola | golgi | 31.2 | 36.72 |
| CDX99123 | Canola | cytosol | 19.5 | 36.46 |
| CDX95908 | Canola | plastid | 36.77 | 36.07 |
| CDY39500 | Canola | cytosol | 31.75 | 35.62 |
| CDX81648 | Canola | plastid | 28.13 | 35.31 |
| CDX74582 | Canola | extracellular, golgi, plastid | 35.65 | 34.22 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 33.98 | 32.88 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.68 | 31.91 |
| CDY44084 | Canola | cytosol | 35.93 | 30.57 |
| CDX86065 | Canola | cytosol | 26.74 | 30.48 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 29.25 | 30.0 |
| CDX80557 | Canola | extracellular | 28.97 | 29.71 |
| CDY19307 | Canola | cytosol | 32.03 | 29.64 |
| CDY19775 | Canola | extracellular | 28.41 | 29.14 |
| CDX87054 | Canola | extracellular | 28.41 | 29.14 |
| CDX82371 | Canola | cytosol | 25.07 | 29.13 |
| CDX87055 | Canola | golgi, plasma membrane | 26.74 | 28.83 |
| CDY24977 | Canola | extracellular | 28.13 | 28.77 |
| KRH68153 | Soybean | cytosol | 24.79 | 28.53 |
| CDY05532 | Canola | extracellular | 27.86 | 28.49 |
| CDX75913 | Canola | cytosol | 24.51 | 28.48 |
| CDY67361 | Canola | vacuole | 27.58 | 28.29 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 27.02 | 28.03 |
| CDY05531 | Canola | cytosol | 23.12 | 27.76 |
| CDY46265 | Canola | plasma membrane | 35.93 | 27.45 |
| CDX88229 | Canola | extracellular | 26.74 | 27.43 |
| CDY05324 | Canola | cytosol | 22.84 | 27.33 |
| CDY29329 | Canola | plasma membrane | 35.65 | 27.18 |
| CDX87056 | Canola | extracellular | 25.63 | 26.82 |
| CDY07146 | Canola | cytosol | 22.01 | 26.78 |
| CDY19777 | Canola | extracellular | 25.63 | 26.74 |
| CDX91854 | Canola | cytosol | 22.01 | 26.6 |
| CDX74378 | Canola | cytosol | 20.89 | 26.13 |
| CDY70520 | Canola | vacuole | 23.96 | 25.9 |
| CDY51713 | Canola | cytosol | 20.89 | 25.42 |
| CDX81956 | Canola | extracellular | 21.73 | 25.41 |
| CDY37377 | Canola | cytosol, plastid | 33.15 | 24.29 |
| CDX84705 | Canola | cytosol | 20.33 | 23.86 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.81 | 23.23 |
| CDX79503 | Canola | cytosol | 19.22 | 22.62 |
| CDY23783 | Canola | cytosol | 18.94 | 22.08 |
| CDY36039 | Canola | vacuole | 55.99 | 21.82 |
| CDY07196 | Canola | cytosol | 17.83 | 21.55 |
| CDY12160 | Canola | cytosol | 17.83 | 20.58 |
| CDY48522 | Canola | cytosol | 15.6 | 20.07 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 14.48 | 18.06 |
Protein Annotations
| EnsemblPlants:CDX82252 | EnsemblPlantsGene:GSBRNA2T00137354001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDX82252 | ProteinID:CDX82252.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI0004EDB599 | MapMan:35.2 | : | : | : |
Description
BnaA03g35690D
Coordinates
chrLK031828:+:245299..247137
Molecular Weight (calculated)
41061.1 Da
IEP (calculated)
9.533
GRAVY (calculated)
-0.234
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSYYIDTLC IISLLSCHFI TSSFAGPVPN VVSGSQKLIP TQISSRDSKV SLSSTVKGLR LRPPSSYSLK LESFSTLMKS TYTERYDSRP FRVGKYNWTL
101: VVYPKGNRND SGTGYISLYV AIDSSTLTSP RQVVPADLRF YVFNKKEKKY FTIQDSDVWQ FTINKTMWGF PRVLPLSTFS NLKNGYLYDM DQCEFGVDIT
201: IPPIFEKSEL FSVAKSFPNK RFTWFIQGFS TLPSDYLSEE FIIGGISWNL RVFRNGFGAH EGKNLSLYLN LGPQELLKTK PYDKIYARAM LRVPNQGQSN
301: YIVQRPLDNW FSPQNIGWGY ADFMPLSDLR DSSTGFVRND MLVVQVEMEA ISTTKYFPS
101: VVYPKGNRND SGTGYISLYV AIDSSTLTSP RQVVPADLRF YVFNKKEKKY FTIQDSDVWQ FTINKTMWGF PRVLPLSTFS NLKNGYLYDM DQCEFGVDIT
201: IPPIFEKSEL FSVAKSFPNK RFTWFIQGFS TLPSDYLSEE FIIGGISWNL RVFRNGFGAH EGKNLSLYLN LGPQELLKTK PYDKIYARAM LRVPNQGQSN
301: YIVQRPLDNW FSPQNIGWGY ADFMPLSDLR DSSTGFVRND MLVVQVEMEA ISTTKYFPS
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.