Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 90.19 | 77.27 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 75.07 | 74.28 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 74.27 | 73.49 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 73.47 | 73.09 |
| CDY50084 | Canola | extracellular, vacuole | 67.9 | 67.02 |
| CDY43081 | Canola | extracellular, vacuole | 67.37 | 66.49 |
| CDY29822 | Canola | vacuole | 69.5 | 65.01 |
| CDX83143 | Canola | cytosol | 54.64 | 64.38 |
| CDY25415 | Canola | vacuole | 67.64 | 63.12 |
| CDX82249 | Canola | plasma membrane, vacuole | 62.33 | 61.36 |
| CDX82251 | Canola | extracellular, golgi | 64.19 | 60.65 |
| CDX82252 | Canola | plastid | 56.76 | 59.61 |
| CDY36041 | Canola | plasma membrane | 55.97 | 59.27 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 60.48 | 59.22 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 57.82 | 58.13 |
| CDY36040 | Canola | extracellular | 54.91 | 54.76 |
| CDY34004 | Canola | cytosol | 42.18 | 53.0 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 45.62 | 52.12 |
| CDY70350 | Canola | plastid | 21.49 | 47.37 |
| CDY70349 | Canola | cytosol | 31.3 | 44.7 |
| CDY44083 | Canola | cytosol | 36.6 | 43.81 |
| CDY04288 | Canola | cytosol | 15.92 | 42.86 |
| CDX99123 | Canola | cytosol | 21.75 | 42.71 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 58.09 | 42.61 |
| CDY07338 | Canola | plastid | 33.16 | 41.39 |
| CDY57407 | Canola | cytosol | 33.69 | 40.97 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 33.42 | 40.91 |
| CDY04290 | Canola | extracellular | 27.32 | 40.08 |
| CDX95908 | Canola | plastid | 37.67 | 38.8 |
| CDY28571 | Canola | cytosol | 23.08 | 38.5 |
| CDY07340 | Canola | plastid | 32.36 | 38.24 |
| CDY04283 | Canola | plastid | 32.1 | 37.93 |
| CDY28575 | Canola | golgi | 30.5 | 37.7 |
| CDY39500 | Canola | cytosol | 31.3 | 36.88 |
| CDX81648 | Canola | plastid | 27.85 | 36.71 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 36.07 | 36.66 |
| CDX74582 | Canola | extracellular, golgi, plastid | 35.81 | 36.1 |
| KRH68153 | Soybean | cytosol | 27.85 | 33.65 |
| CDX86065 | Canola | cytosol | 28.12 | 33.65 |
| CDX82371 | Canola | cytosol | 27.06 | 33.01 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.5 | 32.86 |
| CDX80557 | Canola | extracellular | 29.97 | 32.29 |
| CDX87055 | Canola | golgi, plasma membrane | 28.38 | 32.13 |
| CDY67361 | Canola | vacuole | 29.71 | 32.0 |
| CDY05532 | Canola | extracellular | 29.71 | 31.91 |
| CDY24977 | Canola | extracellular | 29.71 | 31.91 |
| CDX87054 | Canola | extracellular | 29.44 | 31.71 |
| CDX88229 | Canola | extracellular | 29.18 | 31.43 |
| CDY19775 | Canola | extracellular | 29.18 | 31.43 |
| CDX75913 | Canola | cytosol | 25.73 | 31.39 |
| CDY44084 | Canola | cytosol | 35.01 | 31.28 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 28.65 | 31.21 |
| CDY19307 | Canola | cytosol | 32.1 | 31.19 |
| CDY70520 | Canola | vacuole | 26.79 | 30.42 |
| CDX87056 | Canola | extracellular | 27.59 | 30.32 |
| CDY19777 | Canola | extracellular | 27.59 | 30.23 |
| CDY05531 | Canola | cytosol | 23.87 | 30.1 |
| CDY05324 | Canola | cytosol | 23.87 | 30.0 |
| CDY29329 | Canola | plasma membrane | 36.34 | 29.09 |
| CDY46265 | Canola | plasma membrane | 36.07 | 28.94 |
| CDX81956 | Canola | extracellular | 22.81 | 28.01 |
| CDX74378 | Canola | cytosol | 20.95 | 27.53 |
| CDY07146 | Canola | cytosol | 21.49 | 27.46 |
| CDX91854 | Canola | cytosol | 21.49 | 27.27 |
| CDY51713 | Canola | cytosol | 20.42 | 26.1 |
| CDY36039 | Canola | vacuole | 62.86 | 25.73 |
| CDY37377 | Canola | cytosol, plastid | 31.83 | 24.49 |
| CDX79503 | Canola | cytosol | 19.63 | 24.26 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.73 | 24.24 |
| CDX84705 | Canola | cytosol | 19.63 | 24.18 |
| CDY12160 | Canola | cytosol | 19.1 | 23.15 |
| CDY23783 | Canola | cytosol | 18.3 | 22.4 |
| CDY07196 | Canola | cytosol | 17.51 | 22.22 |
| CDY48522 | Canola | cytosol | 16.18 | 21.86 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 15.92 | 20.83 |
Protein Annotations
| EnsemblPlants:CDX82246 | EnsemblPlantsGene:GSBRNA2T00137348001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDX82246 | ProteinID:CDX82246.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EDE118 | MapMan:35.1 | : | : |
Description
BnaA03g35750D
Coordinates
chrLK031828:-:198937..201143
Molecular Weight (calculated)
43238.0 Da
IEP (calculated)
8.751
GRAVY (calculated)
-0.397
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSHYRNTIS IASLLFCLYI TSASARSFIR QYTDDFNIKL QQENGAGPNP NVGEANYVDK LQEISSRDYK VSASNAVKGL RDRPPSSYTL KMESFNTLLK
101: SNYAERYESR PFAVGGYNWT LVVYPNGNKK DSGSGYLSLY VAIDNSTLVA AHQEVLADLR FYIFNNNERK YFTIQDTTVW RFNVFKTMWG FSQVLPVDTF
201: KDPKNGYLYD GDHCEFGVDV IIPSIAENSE LFSATEKFYN PTFTWTIRGF STLLKDMYSS DVFTIGGRSW NIQVYPNGRG EGEGKFLSMF LKLNGEEKLR
301: PYEKVYVRAK LRVLNQSKLN NVQNQLDSWF SRAVPSWGFR KLISFDDLRD SSKGFLVNDM LMVQVEMEAV SSTKYFP
101: SNYAERYESR PFAVGGYNWT LVVYPNGNKK DSGSGYLSLY VAIDNSTLVA AHQEVLADLR FYIFNNNERK YFTIQDTTVW RFNVFKTMWG FSQVLPVDTF
201: KDPKNGYLYD GDHCEFGVDV IIPSIAENSE LFSATEKFYN PTFTWTIRGF STLLKDMYSS DVFTIGGRSW NIQVYPNGRG EGEGKFLSMF LKLNGEEKLR
301: PYEKVYVRAK LRVLNQSKLN NVQNQLDSWF SRAVPSWGFR KLISFDDLRD SSKGFLVNDM LMVQVEMEAV SSTKYFP
001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
Arabidopsis Description
AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.