Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19777 | Canola | extracellular | 98.25 | 97.97 |
| CDX87055 | Canola | golgi, plasma membrane | 74.64 | 76.88 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 75.51 | 74.86 |
| CDY70520 | Canola | vacuole | 68.51 | 70.78 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.72 | 70.29 |
| CDX80557 | Canola | extracellular | 70.55 | 69.14 |
| CDY67361 | Canola | vacuole | 70.55 | 69.14 |
| CDX88229 | Canola | extracellular | 70.26 | 68.86 |
| CDX87054 | Canola | extracellular | 69.39 | 68.0 |
| CDY05532 | Canola | extracellular | 69.39 | 67.81 |
| CDY24977 | Canola | extracellular | 69.39 | 67.81 |
| CDY19775 | Canola | extracellular | 68.8 | 67.43 |
| CDX81956 | Canola | extracellular | 60.06 | 67.1 |
| CDY05531 | Canola | cytosol | 56.56 | 64.88 |
| CDY05324 | Canola | cytosol | 54.23 | 62.0 |
| AT5G26320.1 | Thale cress | vacuole | 60.64 | 59.09 |
| CDY70350 | Canola | plastid | 15.74 | 31.58 |
| CDY04288 | Canola | cytosol | 12.54 | 30.71 |
| CDY44083 | Canola | cytosol | 26.82 | 29.21 |
| KRH68153 | Soybean | cytosol | 26.24 | 28.85 |
| CDX83143 | Canola | cytosol | 26.53 | 28.44 |
| CDY04290 | Canola | extracellular | 20.99 | 28.02 |
| CDY70349 | Canola | cytosol | 21.28 | 27.65 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 30.32 | 27.59 |
| CDX82371 | Canola | cytosol | 24.78 | 27.51 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 30.32 | 27.3 |
| CDX75913 | Canola | cytosol | 24.49 | 27.18 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 30.03 | 27.03 |
| CDY43081 | Canola | extracellular, vacuole | 30.03 | 26.96 |
| CDY07338 | Canola | plastid | 23.62 | 26.82 |
| CDY50084 | Canola | extracellular, vacuole | 29.74 | 26.7 |
| CDX82249 | Canola | plasma membrane, vacuole | 29.74 | 26.63 |
| CDY39500 | Canola | cytosol | 24.49 | 26.25 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 23.32 | 25.97 |
| CDY28575 | Canola | golgi | 23.03 | 25.9 |
| CDX82252 | Canola | plastid | 26.82 | 25.63 |
| CDX82251 | Canola | extracellular, golgi | 29.74 | 25.56 |
| CDX99123 | Canola | cytosol | 14.29 | 25.52 |
| CDY07146 | Canola | cytosol | 21.87 | 25.42 |
| CDY36041 | Canola | plasma membrane | 26.24 | 25.28 |
| CDX91854 | Canola | cytosol | 21.87 | 25.25 |
| CDY23783 | Canola | cytosol | 22.45 | 25.0 |
| CDY36040 | Canola | extracellular | 27.41 | 24.87 |
| CDY57407 | Canola | cytosol | 22.45 | 24.84 |
| CDY29822 | Canola | vacuole | 29.15 | 24.81 |
| CDY28571 | Canola | cytosol | 16.33 | 24.78 |
| CDY07340 | Canola | plastid | 23.03 | 24.76 |
| CDY12160 | Canola | cytosol | 22.45 | 24.76 |
| CDY25415 | Canola | vacuole | 29.15 | 24.75 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 27.7 | 24.68 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 20.7 | 24.65 |
| CDY51713 | Canola | cytosol | 20.99 | 24.41 |
| CDX74378 | Canola | cytosol | 20.41 | 24.39 |
| CDX95908 | Canola | plastid | 25.95 | 24.32 |
| CDX79503 | Canola | cytosol | 21.57 | 24.26 |
| CDY04283 | Canola | plastid | 22.45 | 24.14 |
| CDX81648 | Canola | plastid | 20.12 | 24.13 |
| CDX84705 | Canola | cytosol | 20.99 | 23.53 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 30.03 | 23.41 |
| CDY34004 | Canola | cytosol | 20.12 | 23.0 |
| CDY07196 | Canola | cytosol | 19.83 | 22.9 |
| CDY48522 | Canola | cytosol | 18.37 | 22.58 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.83 | 22.22 |
| CDX74582 | Canola | extracellular, golgi, plastid | 23.03 | 21.12 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 22.16 | 20.49 |
| CDY19307 | Canola | cytosol | 23.03 | 20.36 |
| CDY44084 | Canola | cytosol | 23.91 | 19.43 |
| CDX86065 | Canola | cytosol | 17.78 | 19.37 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 18.37 | 19.09 |
| CDY46265 | Canola | plasma membrane | 24.2 | 17.66 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.95 | 17.32 |
| CDY29329 | Canola | plasma membrane | 23.62 | 17.2 |
| CDY37377 | Canola | cytosol, plastid | 22.74 | 15.92 |
| CDY36039 | Canola | vacuole | 30.03 | 11.18 |
Protein Annotations
| EnsemblPlants:CDX87056 | EnsemblPlantsGene:GSBRNA2T00145943001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDX87056 | ProteinID:CDX87056.1 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00061 | SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI000189CF86 | MapMan:35.1 | : |
Description
BnaC09g03710D
Coordinates
chrLK031849:+:212926..214858
Molecular Weight (calculated)
39185.5 Da
IEP (calculated)
9.106
GRAVY (calculated)
-0.259
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGRWSLRV ICFAFFFIIT SSSAEFLIQQ VTEYNSSYNL NANLGVTREL RTERPSSKIV TIGNFSVVME RFEPYESSVF EASGYKWRLI LYVTGNKDDG
101: GNNHVSLYVR IEDTESLPTG WEVNVDLKLF VFNARRGKYL TVTDEAVKRY NQGNREWGFG QLIPLSTFRN PNQGFIVQNT VSFGAEIFII RPVGQQERVS
201: FVSNPPDNVF TWRILRFSSL EDKIYYSSEF LVGDRFWRLG FNPKGEGEGK PHAIPIFLYA QGFRPNAVET STWGAVNLRL RHQLGSNPKR ASSAAWYPIQ
301: PGHREGVSNI ILRKDLQDGY LVKDSIVFEA EMVRVSVTNI VPV
101: GNNHVSLYVR IEDTESLPTG WEVNVDLKLF VFNARRGKYL TVTDEAVKRY NQGNREWGFG QLIPLSTFRN PNQGFIVQNT VSFGAEIFII RPVGQQERVS
201: FVSNPPDNVF TWRILRFSSL EDKIYYSSEF LVGDRFWRLG FNPKGEGEGK PHAIPIFLYA QGFRPNAVET STWGAVNLRL RHQLGSNPKR ASSAAWYPIQ
301: PGHREGVSNI ILRKDLQDGY LVKDSIVFEA EMVRVSVTNI VPV
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.