Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82251 | Canola | extracellular, golgi | 76.1 | 73.43 |
| CDX82249 | Canola | plasma membrane, vacuole | 71.17 | 71.54 |
| CDY36040 | Canola | extracellular | 67.01 | 68.25 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 61.56 | 62.2 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 60.78 | 61.42 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 60.26 | 61.21 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 59.22 | 60.48 |
| CDY43081 | Canola | extracellular, vacuole | 59.22 | 59.69 |
| CDY50084 | Canola | extracellular, vacuole | 57.66 | 58.12 |
| CDY29822 | Canola | vacuole | 59.48 | 56.82 |
| CDY25415 | Canola | vacuole | 58.18 | 55.45 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 60.26 | 52.73 |
| CDX83143 | Canola | cytosol | 43.12 | 51.88 |
| CDX82252 | Canola | plastid | 47.79 | 51.25 |
| CDY36041 | Canola | plasma membrane | 46.23 | 50.0 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 45.97 | 47.2 |
| CDY34004 | Canola | cytosol | 35.32 | 45.33 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 37.14 | 43.33 |
| CDY70349 | Canola | cytosol | 27.79 | 40.53 |
| CDY04288 | Canola | cytosol | 14.55 | 40.0 |
| CDY70350 | Canola | plastid | 17.4 | 39.18 |
| CDX99123 | Canola | cytosol | 19.22 | 38.54 |
| CDY44083 | Canola | cytosol | 31.43 | 38.41 |
| CDY28571 | Canola | cytosol | 22.08 | 37.61 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 29.61 | 37.01 |
| CDY07338 | Canola | plastid | 28.83 | 36.76 |
| CDY57407 | Canola | cytosol | 29.35 | 36.45 |
| CDY28575 | Canola | golgi | 28.05 | 35.41 |
| CDY04290 | Canola | extracellular | 23.64 | 35.41 |
| CDX81648 | Canola | plastid | 26.23 | 35.31 |
| CDX95908 | Canola | plastid | 33.25 | 34.97 |
| CDX74582 | Canola | extracellular, golgi, plastid | 33.77 | 34.76 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.23 | 34.63 |
| CDY07340 | Canola | plastid | 28.57 | 34.48 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 32.99 | 34.23 |
| CDY39500 | Canola | cytosol | 28.31 | 34.06 |
| CDY04283 | Canola | plastid | 28.05 | 33.86 |
| CDX82371 | Canola | cytosol | 24.42 | 30.42 |
| CDX87055 | Canola | golgi, plasma membrane | 25.97 | 30.03 |
| CDX86065 | Canola | cytosol | 24.42 | 29.84 |
| CDY36039 | Canola | vacuole | 70.91 | 29.64 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 26.49 | 29.48 |
| CDX87054 | Canola | extracellular | 26.75 | 29.43 |
| CDY67361 | Canola | vacuole | 26.49 | 29.14 |
| CDX80557 | Canola | extracellular | 26.49 | 29.14 |
| CDY19775 | Canola | extracellular | 26.49 | 29.14 |
| CDX75913 | Canola | cytosol | 23.38 | 29.13 |
| CDY44084 | Canola | cytosol | 31.69 | 28.91 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.23 | 28.86 |
| CDY05531 | Canola | cytosol | 22.08 | 28.43 |
| CDY19307 | Canola | cytosol | 28.57 | 28.35 |
| CDX88229 | Canola | extracellular | 25.71 | 28.29 |
| CDY24977 | Canola | extracellular | 25.71 | 28.21 |
| CDY05532 | Canola | extracellular | 25.71 | 28.21 |
| CDX87056 | Canola | extracellular | 24.68 | 27.7 |
| CDY05324 | Canola | cytosol | 21.56 | 27.67 |
| CDY19777 | Canola | extracellular | 24.68 | 27.62 |
| KRH68153 | Soybean | cytosol | 22.08 | 27.24 |
| CDY70520 | Canola | vacuole | 23.38 | 27.11 |
| CDY46265 | Canola | plasma membrane | 32.99 | 27.02 |
| CDY29329 | Canola | plasma membrane | 32.99 | 26.96 |
| CDX91854 | Canola | cytosol | 20.78 | 26.94 |
| CDX74378 | Canola | cytosol | 19.48 | 26.13 |
| CDX81956 | Canola | extracellular | 20.78 | 26.06 |
| CDY07146 | Canola | cytosol | 19.22 | 25.08 |
| CDY51713 | Canola | cytosol | 18.7 | 24.41 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 11.95 | 23.23 |
| CDY23783 | Canola | cytosol | 18.44 | 23.05 |
| CDY37377 | Canola | cytosol, plastid | 28.31 | 22.24 |
| CDY07196 | Canola | cytosol | 16.88 | 21.89 |
| CDY48522 | Canola | cytosol | 15.58 | 21.51 |
| CDX79503 | Canola | cytosol | 16.88 | 21.31 |
| CDX84705 | Canola | cytosol | 15.84 | 19.93 |
| CDY12160 | Canola | cytosol | 15.84 | 19.61 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 12.73 | 17.01 |
Protein Annotations
| EnsemblPlants:CDY50282 | EnsemblPlantsGene:GSBRNA2T00096358001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY50282 | ProteinID:CDY50282.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EEC693 | UniProt:A0A078IK56 | MapMan:35.1 | : |
Description
BnaC02g45370DBnaC02g45370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK56]
Coordinates
chrLK032896:+:68327..72563
Molecular Weight (calculated)
44314.3 Da
IEP (calculated)
9.010
GRAVY (calculated)
-0.350
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSHYTNTIY AVYVLFCLLI TSASAQSLIR EYTDDLKTTP QQENGAKADT NLGEAHYLDK DDDLEISSRD YKVPLSNQVT GMRDRPPMSY SLKIEAFNTI
101: LQSQERDRYR SGPFSVGGYN WSLIVFPNGN RHDGGSGFIS LYVAIDNSTL VFSHQEVIAD LRVYVFSRST RQYFTMQAAH VWRYNVFKTM WGFPRVMSLA
201: AFRDPRNGYL FNGDHCEFGV DVTFPTTFQR SELFTVARNF PNPRFTWTIQ RFSTLLGDTY LSDAFSIGGR NWNIQLYPTG FSTGEGRFLS MYIVLNANES
301: LRPYESIYVR AQLRVLNQLA SPHWRTIDRP INHWINRPGP GLGWGYPEFI SLADLRDSRR GYVVNDTLRV QVEILAVSST RYLPR
101: LQSQERDRYR SGPFSVGGYN WSLIVFPNGN RHDGGSGFIS LYVAIDNSTL VFSHQEVIAD LRVYVFSRST RQYFTMQAAH VWRYNVFKTM WGFPRVMSLA
201: AFRDPRNGYL FNGDHCEFGV DVTFPTTFQR SELFTVARNF PNPRFTWTIQ RFSTLLGDTY LSDAFSIGGR NWNIQLYPTG FSTGEGRFLS MYIVLNANES
301: LRPYESIYVR AQLRVLNQLA SPHWRTIDRP INHWINRPGP GLGWGYPEFI SLADLRDSRR GYVVNDTLRV QVEILAVSST RYLPR
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.