Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70520 Canola vacuole 89.9 83.13
CDX80557 Canola extracellular 86.97 76.29
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 86.97 76.29
CDY67361 Canola vacuole 85.34 74.86
CDX88229 Canola extracellular 84.69 74.29
CDX87054 Canola extracellular 82.74 72.57
CDY19775 Canola extracellular 82.08 72.0
CDY05532 Canola extracellular 80.78 70.66
CDY24977 Canola extracellular 80.46 70.37
CDY05531 Canola cytosol 65.8 67.56
CDY05324 Canola cytosol 63.19 64.67
AT5G26320.1 Thale cress vacuole 71.01 61.93
CDX87056 Canola extracellular 67.1 60.06
CDY19777 Canola extracellular 67.1 59.88
CDX87055 Canola golgi, plasma membrane 64.17 59.16
CDY19776 Canola extracellular, plasma membrane, vacuole 66.12 58.67
CDY04288 Canola cytosol 13.68 30.0
CDY70350 Canola plastid 14.01 25.15
CDY28571 Canola cytosol 18.24 24.78
CDX99123 Canola cytosol 15.31 24.48
CDY44083 Canola cytosol 25.08 24.44
CDY70349 Canola cytosol 20.85 24.24
KRH68153 Soybean cytosol 24.1 23.72
CDX75913 Canola cytosol 23.78 23.62
CDX82371 Canola cytosol 23.78 23.62
CDY43080 Canola endoplasmic reticulum, vacuole 28.99 23.36
CDY50083 Canola endoplasmic reticulum, vacuole 28.66 23.1
CDX82246 Canola endoplasmic reticulum, extracellular 28.01 22.81
CDY50084 Canola extracellular, vacuole 28.34 22.77
CDY43081 Canola extracellular, vacuole 28.34 22.77
CDY58708 Canola cytosol, nucleus, plastid 22.8 22.73
CDX91854 Canola cytosol 21.82 22.56
CDY39500 Canola cytosol 23.13 22.19
CDY07338 Canola plastid 21.82 22.19
CDY04290 Canola extracellular 18.57 22.18
CDY07146 Canola cytosol 21.17 22.03
CDX74378 Canola cytosol 20.52 21.95
CDX82252 Canola plastid 25.41 21.73
CDX95908 Canola plastid 25.73 21.58
CDY23783 Canola cytosol 21.5 21.43
CDY36041 Canola plasma membrane 24.76 21.35
CDX84705 Canola cytosol 21.17 21.24
CDX82249 Canola plasma membrane, vacuole 26.38 21.15
CDY51713 Canola cytosol 20.2 21.02
CDX82251 Canola extracellular, golgi 27.04 20.8
CDY50282 Canola endoplasmic reticulum, vacuole 26.06 20.78
CDX79503 Canola cytosol 20.52 20.66
CDX83143 Canola cytosol 21.5 20.62
CDY12160 Canola cytosol 20.85 20.58
CDY25415 Canola vacuole 27.04 20.54
CDY60616 Canola cytosol, mitochondrion, plastid 19.22 20.49
CDY04283 Canola plastid 21.17 20.38
CDY07340 Canola plastid 21.17 20.38
CDY29822 Canola vacuole 26.71 20.35
CDY28575 Canola golgi 20.2 20.33
CDX81648 Canola plastid 18.89 20.28
CDX91855 Canola extracellular, plasma membrane, vacuole 13.03 20.2
CDX82248 Canola endoplasmic reticulum, vacuole 28.66 20.0
CDY36040 Canola extracellular 24.43 19.84
CDX74582 Canola extracellular, golgi, plastid 23.78 19.52
CDY57407 Canola cytosol 19.54 19.35
CDY07196 Canola cytosol 18.24 18.86
CDY48522 Canola cytosol 16.94 18.64
CDX86065 Canola cytosol 18.57 18.1
CDY19307 Canola cytosol 22.48 17.78
CDY44084 Canola cytosol 24.1 17.54
CDY39666 Canola endoplasmic reticulum, vacuole 18.57 17.27
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 20.2 16.71
CDY34004 Canola cytosol 14.66 15.0
CDY46265 Canola plasma membrane 22.15 14.47
CDY29329 Canola plasma membrane 21.5 14.01
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 21.82 13.04
CDY37377 Canola cytosol, plastid 20.52 12.86
CDY36039 Canola vacuole 26.38 8.79
Protein Annotations
EnsemblPlants:CDX81956EnsemblPlantsGene:GSBRNA2T00136928001Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likePANTHER:PTHR26379PANTHER:PTHR26379:SF214
PFAM:PF00917PFscan:PS50144ProteinID:CDX81956ProteinID:CDX81956.1SignalP:SignalP-noTMSUPFAM:SSF49599
UniParc:UPI0004EDC790MapMan:35.2::::
Description
BnaC08g36450D
Coordinates
chrLK031826:+:1652650..1654096
Molecular Weight (calculated)
34508.9 Da
IEP (calculated)
8.835
GRAVY (calculated)
-0.212
Length
307 amino acids
Sequence
(BLAST)
001: MDGQKWSLGF ISLAFLFITC SSAELLIQQV TGGRGTEINS SYSLEANLGV TRVFRDGRPS SKILTIAGYS VIKGRPEYYE SSAFEAAGYK WMEETESLPY
101: GWEVNVDLKL FVHNPKQHKY LVVTDGAVKR FNAAKKEWGY GQLISLATFQ NTNQGYIVQN ACSFGAEIFI VKPAEQQEKV TFISNPPNNV FTWKVLRFSS
201: LEDKFYYSDE FLVGDKILVR FNQKGDGDGR PHALPIYLYA QGFRPNAVAT TTWGAVNLRL KNQRGSNHRQ LYSAAWYPVR SDYGLVNDAI VFEAEIVKVS
301: VTNIVPA
Best Arabidopsis Sequence Match ( AT5G26260.1 )
(BLAST)
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.