Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020540.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY05324 | Canola | cytosol | 91.64 | 91.33 |
| CDY24977 | Canola | extracellular | 86.29 | 73.5 |
| CDY05532 | Canola | extracellular | 85.95 | 73.22 |
| CDY70520 | Canola | vacuole | 80.6 | 72.59 |
| CDY67361 | Canola | vacuole | 84.28 | 72.0 |
| CDX88229 | Canola | extracellular | 84.28 | 72.0 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 82.27 | 70.29 |
| CDX80557 | Canola | extracellular | 81.61 | 69.71 |
| CDX87054 | Canola | extracellular | 80.94 | 69.14 |
| CDY19775 | Canola | extracellular | 79.6 | 68.0 |
| CDX81956 | Canola | extracellular | 67.56 | 65.8 |
| AT5G26320.1 | Thale cress | vacuole | 68.9 | 58.52 |
| CDX87055 | Canola | golgi, plasma membrane | 64.88 | 58.26 |
| CDX87056 | Canola | extracellular | 64.88 | 56.56 |
| CDY19777 | Canola | extracellular | 64.21 | 55.81 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 63.21 | 54.62 |
| CDY04288 | Canola | cytosol | 14.05 | 30.0 |
| CDX99123 | Canola | cytosol | 18.73 | 29.17 |
| CDY70350 | Canola | plastid | 16.05 | 28.07 |
| KRH68153 | Soybean | cytosol | 29.1 | 27.88 |
| CDY70349 | Canola | cytosol | 24.41 | 27.65 |
| CDY44083 | Canola | cytosol | 29.1 | 27.62 |
| CDY28571 | Canola | cytosol | 20.07 | 26.55 |
| CDX75913 | Canola | cytosol | 26.76 | 25.89 |
| CDX82371 | Canola | cytosol | 26.76 | 25.89 |
| CDY07338 | Canola | plastid | 26.09 | 25.83 |
| CDY04290 | Canola | extracellular | 22.07 | 25.68 |
| CDX83143 | Canola | cytosol | 26.76 | 25.0 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 25.42 | 24.68 |
| CDY23783 | Canola | cytosol | 25.42 | 24.68 |
| CDY50084 | Canola | extracellular, vacuole | 31.44 | 24.61 |
| CDY43081 | Canola | extracellular, vacuole | 31.44 | 24.61 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 30.77 | 24.15 |
| CDX79503 | Canola | cytosol | 24.41 | 23.93 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 30.43 | 23.88 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 30.1 | 23.87 |
| CDX84705 | Canola | cytosol | 24.41 | 23.86 |
| CDX81648 | Canola | plastid | 22.74 | 23.78 |
| CDX95908 | Canola | plastid | 29.1 | 23.77 |
| CDY39500 | Canola | cytosol | 25.42 | 23.75 |
| CDY07146 | Canola | cytosol | 23.41 | 23.73 |
| CDY28575 | Canola | golgi | 24.08 | 23.61 |
| CDY12160 | Canola | cytosol | 24.41 | 23.47 |
| CDX91854 | Canola | cytosol | 23.08 | 23.23 |
| CDY57407 | Canola | cytosol | 24.08 | 23.23 |
| CDY04283 | Canola | plastid | 24.75 | 23.2 |
| CDX82252 | Canola | plastid | 27.76 | 23.12 |
| CDY51713 | Canola | cytosol | 22.74 | 23.05 |
| CDX74378 | Canola | cytosol | 22.07 | 23.0 |
| CDY07340 | Canola | plastid | 24.41 | 22.88 |
| CDY36041 | Canola | plasma membrane | 27.09 | 22.75 |
| CDX82249 | Canola | plasma membrane, vacuole | 28.76 | 22.45 |
| CDX82251 | Canola | extracellular, golgi | 29.77 | 22.31 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 28.43 | 22.08 |
| CDY36040 | Canola | extracellular | 27.76 | 21.96 |
| CDY07196 | Canola | cytosol | 21.74 | 21.89 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 21.07 | 21.88 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 14.38 | 21.72 |
| CDY29822 | Canola | vacuole | 28.76 | 21.34 |
| CDY25415 | Canola | vacuole | 28.76 | 21.29 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 31.1 | 21.14 |
| CDY48522 | Canola | cytosol | 19.4 | 20.79 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 25.75 | 20.75 |
| CDX74582 | Canola | extracellular, golgi, plastid | 25.42 | 20.32 |
| CDY34004 | Canola | cytosol | 20.07 | 20.0 |
| CDY19307 | Canola | cytosol | 24.75 | 19.07 |
| CDY44084 | Canola | cytosol | 26.76 | 18.96 |
| CDX86065 | Canola | cytosol | 19.73 | 18.73 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 19.73 | 17.88 |
| CDY46265 | Canola | plasma membrane | 24.41 | 15.53 |
| CDY29329 | Canola | plasma membrane | 24.08 | 15.29 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.42 | 14.79 |
| CDY37377 | Canola | cytosol, plastid | 23.75 | 14.49 |
| CDY36039 | Canola | vacuole | 29.1 | 9.45 |
Protein Annotations
| EnsemblPlants:CDY05531 | EnsemblPlantsGene:GSBRNA2T00120472001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF214 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY05531 | ProteinID:CDY05531.1 | SMART:SM00061 | SUPFAM:SSF49599 |
| UniParc:UPI0002546C95 | MapMan:35.2 | : | : | : | : |
Description
BnaA02g31600D
Coordinates
chrLK031962:-:699464..701617
Molecular Weight (calculated)
33895.3 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.186
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTQETSLGV TRVLREERPS SKIVTIAGYS VIKGRGEPYE SSVFEAAGYK WRLVLHVGRA GYISLYVRIE ETETIPYGLE VNVDLKLLVH VPKLDKYLTV
101: TDGAVKRFNA EKKEWGFEQL IDLASFENTN EGYIVQDTCS FGAEIFIVKP AKVQEKVTFI SNPPRNVFTW EIPHFSDMED KFYYSDDFLV EDRYWRLGFN
201: PKGGSALPIY LYAQGFRPDA VATNTWGAVN LRLKNQRSTN HRQIYSAAWY PIRSGYGVGV NNIILLADLN DASKGYLVND AIIFEAEMVK VTVTNIVSV
101: TDGAVKRFNA EKKEWGFEQL IDLASFENTN EGYIVQDTCS FGAEIFIVKP AKVQEKVTFI SNPPRNVFTW EIPHFSDMED KFYYSDDFLV EDRYWRLGFN
201: PKGGSALPIY LYAQGFRPDA VATNTWGAVN LRLKNQRSTN HRQIYSAAWY PIRSGYGVGV NNIILLADLN DASKGYLVND AIIFEAEMVK VTVTNIVSV
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.