Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87055 | Canola | golgi, plasma membrane | 93.64 | 97.3 |
| CDX87056 | Canola | extracellular | 74.86 | 75.51 |
| CDY19777 | Canola | extracellular | 74.57 | 75.0 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.94 | 69.14 |
| CDX80557 | Canola | extracellular | 68.5 | 67.71 |
| CDY70520 | Canola | vacuole | 64.45 | 67.17 |
| CDX88229 | Canola | extracellular | 67.92 | 67.14 |
| CDY67361 | Canola | vacuole | 67.92 | 67.14 |
| CDX81956 | Canola | extracellular | 58.67 | 66.12 |
| CDX87054 | Canola | extracellular | 66.76 | 66.0 |
| CDY19775 | Canola | extracellular | 66.19 | 65.43 |
| CDY05532 | Canola | extracellular | 65.9 | 64.96 |
| CDY24977 | Canola | extracellular | 65.9 | 64.96 |
| CDY05531 | Canola | cytosol | 54.62 | 63.21 |
| CDY05324 | Canola | cytosol | 52.6 | 60.67 |
| AT5G26320.1 | Thale cress | vacuole | 60.69 | 59.66 |
| CDY70350 | Canola | plastid | 15.61 | 31.58 |
| KRH68153 | Soybean | cytosol | 27.46 | 30.45 |
| CDY04288 | Canola | cytosol | 12.14 | 30.0 |
| CDX75913 | Canola | cytosol | 26.3 | 29.45 |
| CDY70349 | Canola | cytosol | 22.25 | 29.17 |
| CDX82371 | Canola | cytosol | 26.01 | 29.13 |
| CDX82249 | Canola | plasma membrane, vacuole | 32.08 | 28.98 |
| CDY44083 | Canola | cytosol | 26.3 | 28.89 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 31.21 | 28.65 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 30.92 | 28.08 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 30.64 | 27.82 |
| CDX99123 | Canola | cytosol | 15.32 | 27.6 |
| CDX82251 | Canola | extracellular, golgi | 31.21 | 27.07 |
| CDX82252 | Canola | plastid | 28.03 | 27.02 |
| CDX83143 | Canola | cytosol | 24.86 | 26.88 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 23.7 | 26.62 |
| CDY28571 | Canola | cytosol | 17.34 | 26.55 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 29.48 | 26.49 |
| CDY36040 | Canola | extracellular | 28.9 | 26.45 |
| CDY43081 | Canola | extracellular, vacuole | 29.19 | 26.44 |
| CDY50084 | Canola | extracellular, vacuole | 29.19 | 26.44 |
| CDY36041 | Canola | plasma membrane | 27.17 | 26.4 |
| CDY07146 | Canola | cytosol | 22.25 | 26.1 |
| CDY04290 | Canola | extracellular | 19.36 | 26.07 |
| CDY29822 | Canola | vacuole | 30.35 | 26.05 |
| CDX91854 | Canola | cytosol | 22.25 | 25.93 |
| CDX81648 | Canola | plastid | 21.39 | 25.87 |
| CDY07338 | Canola | plastid | 22.54 | 25.83 |
| CDY25415 | Canola | vacuole | 29.77 | 25.5 |
| CDY51713 | Canola | cytosol | 21.68 | 25.42 |
| CDY23783 | Canola | cytosol | 22.54 | 25.32 |
| CDY28575 | Canola | golgi | 22.25 | 25.25 |
| CDX74378 | Canola | cytosol | 20.81 | 25.09 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 31.21 | 24.55 |
| CDY57407 | Canola | cytosol | 21.97 | 24.52 |
| CDX95908 | Canola | plastid | 25.72 | 24.32 |
| CDY39500 | Canola | cytosol | 22.25 | 24.06 |
| CDX84705 | Canola | cytosol | 20.81 | 23.53 |
| CDY12160 | Canola | cytosol | 21.1 | 23.47 |
| CDX79503 | Canola | cytosol | 20.52 | 23.28 |
| CDY07340 | Canola | plastid | 21.39 | 23.2 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 19.08 | 22.92 |
| CDY04283 | Canola | plastid | 21.1 | 22.88 |
| CDX74582 | Canola | extracellular, golgi, plastid | 24.57 | 22.73 |
| CDY34004 | Canola | cytosol | 19.65 | 22.67 |
| CDY07196 | Canola | cytosol | 19.08 | 22.22 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.72 | 22.22 |
| CDY48522 | Canola | cytosol | 17.63 | 21.86 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 23.41 | 21.83 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 20.23 | 21.21 |
| CDX86065 | Canola | cytosol | 18.21 | 20.0 |
| CDY44084 | Canola | cytosol | 23.99 | 19.67 |
| CDY46265 | Canola | plasma membrane | 26.3 | 19.36 |
| CDY19307 | Canola | cytosol | 21.39 | 19.07 |
| CDY29329 | Canola | plasma membrane | 25.72 | 18.9 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.3 | 17.7 |
| CDY37377 | Canola | cytosol, plastid | 23.12 | 16.33 |
| CDY36039 | Canola | vacuole | 32.37 | 12.16 |
Protein Annotations
| EnsemblPlants:CDY19776 | EnsemblPlantsGene:GSBRNA2T00009524001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY19776 | ProteinID:CDY19776.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EE574B | UniProt:A0A078G357 | MapMan:35.1 | : |
Description
BnaA09g04290DBnaA09g04290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G357]
Coordinates
chrLK032100:+:313970..315907
Molecular Weight (calculated)
39648.1 Da
IEP (calculated)
9.084
GRAVY (calculated)
-0.287
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MENRTWSLRV ICFVFFFITS SSAEFLIRQV TESKDSSVLE TEYNLNTNLG LTRVLRNQRP SSKIVTIGSF SVIRERSEPY ESSVFEASGY KWRLILYMNG
101: NKNDGGNNHV SLYVRIEDTE SLPTGWEVDV DLKLFVHNAR QRQYLTVSDE TVKRYNQGYR EWGYAQLIPL STFHNPSQGY IVQDTCSFGA EIFIVKPVEQ
201: QERVTVVSNP PNNVFTWRLL RFSTLQNKFY NSPSFLVGDR YWRLETNPRG VGPGAPHLPF NLEAQGFRPN AVATTTWGAV NLRLRDQLGS NHRLGYSAAW
301: YPIRPGYKVG LNIIYIRDLR GGYLVNDSIV LEAEMVMVSV TNIVPI
101: NKNDGGNNHV SLYVRIEDTE SLPTGWEVDV DLKLFVHNAR QRQYLTVSDE TVKRYNQGYR EWGYAQLIPL STFHNPSQGY IVQDTCSFGA EIFIVKPVEQ
201: QERVTVVSNP PNNVFTWRLL RFSTLQNKFY NSPSFLVGDR YWRLETNPRG VGPGAPHLPF NLEAQGFRPN AVATTTWGAV NLRLRDQLGS NHRLGYSAAW
301: YPIRPGYKVG LNIIYIRDLR GGYLVNDSIV LEAEMVMVSV TNIVPI
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.