Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.79 | 50.58 |
| CDX83143 | Canola | cytosol | 46.67 | 48.12 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 52.12 | 45.62 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 50.61 | 43.83 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 50.61 | 43.83 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 50.0 | 43.54 |
| CDY43081 | Canola | extracellular, vacuole | 50.3 | 43.46 |
| CDY34004 | Canola | cytosol | 39.09 | 43.0 |
| CDY50084 | Canola | extracellular, vacuole | 49.09 | 42.41 |
| CDX82249 | Canola | plasma membrane, vacuole | 46.06 | 39.69 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 51.82 | 38.86 |
| CDY29822 | Canola | vacuole | 47.27 | 38.71 |
| CDX82251 | Canola | extracellular, golgi | 45.15 | 37.34 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 43.33 | 37.14 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 42.12 | 37.07 |
| CDY25415 | Canola | vacuole | 44.85 | 36.63 |
| CDY36041 | Canola | plasma membrane | 38.18 | 35.39 |
| CDX82252 | Canola | plastid | 37.88 | 34.82 |
| CDX99123 | Canola | cytosol | 20.0 | 34.38 |
| CDY36040 | Canola | extracellular | 38.18 | 33.33 |
| CDX74582 | Canola | extracellular, golgi, plastid | 32.42 | 28.61 |
| CDY28571 | Canola | cytosol | 19.39 | 28.32 |
| CDY07338 | Canola | plastid | 25.45 | 27.81 |
| CDY44083 | Canola | cytosol | 26.36 | 27.62 |
| CDY04283 | Canola | plastid | 26.06 | 26.96 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 25.15 | 26.95 |
| CDY70349 | Canola | cytosol | 21.21 | 26.52 |
| CDY04290 | Canola | extracellular | 20.61 | 26.46 |
| CDY07340 | Canola | plastid | 25.45 | 26.33 |
| CDY28575 | Canola | golgi | 23.94 | 25.9 |
| CDX86065 | Canola | cytosol | 24.55 | 25.71 |
| CDY57407 | Canola | cytosol | 23.94 | 25.48 |
| CDY70350 | Canola | plastid | 13.03 | 25.15 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 27.27 | 24.26 |
| CDY39500 | Canola | cytosol | 23.03 | 23.75 |
| CDY04288 | Canola | cytosol | 10.0 | 23.57 |
| CDX91854 | Canola | cytosol | 20.91 | 23.23 |
| CDX95908 | Canola | plastid | 25.15 | 22.68 |
| CDX74378 | Canola | cytosol | 19.39 | 22.3 |
| CDY46265 | Canola | plasma membrane | 31.21 | 21.91 |
| CDX82371 | Canola | cytosol | 20.3 | 21.68 |
| CDY29329 | Canola | plasma membrane | 30.91 | 21.66 |
| KRH68153 | Soybean | cytosol | 20.0 | 21.15 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 22.42 | 21.14 |
| CDX75913 | Canola | cytosol | 19.7 | 21.04 |
| CDX81648 | Canola | plastid | 18.18 | 20.98 |
| CDX88229 | Canola | extracellular | 22.12 | 20.86 |
| CDX80557 | Canola | extracellular | 22.12 | 20.86 |
| CDY24977 | Canola | extracellular | 22.12 | 20.8 |
| CDY05532 | Canola | extracellular | 22.12 | 20.8 |
| CDY44084 | Canola | cytosol | 26.36 | 20.62 |
| CDY67361 | Canola | vacuole | 21.82 | 20.57 |
| CDY70520 | Canola | vacuole | 20.61 | 20.48 |
| CDX87055 | Canola | golgi, plasma membrane | 20.61 | 20.42 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 21.21 | 20.23 |
| CDX87054 | Canola | extracellular | 21.21 | 20.0 |
| CDY19775 | Canola | extracellular | 21.21 | 20.0 |
| CDY07146 | Canola | cytosol | 17.88 | 20.0 |
| CDY05531 | Canola | cytosol | 17.88 | 19.73 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 11.82 | 19.7 |
| CDY51713 | Canola | cytosol | 17.58 | 19.66 |
| CDY19307 | Canola | cytosol | 23.03 | 19.59 |
| CDY05324 | Canola | cytosol | 17.58 | 19.33 |
| CDX84705 | Canola | cytosol | 17.58 | 18.95 |
| CDY19777 | Canola | extracellular | 19.39 | 18.6 |
| CDX81956 | Canola | extracellular | 17.27 | 18.57 |
| CDX87056 | Canola | extracellular | 19.09 | 18.37 |
| CDX79503 | Canola | cytosol | 16.97 | 18.36 |
| CDY48522 | Canola | cytosol | 15.45 | 18.28 |
| CDY07196 | Canola | cytosol | 16.36 | 18.18 |
| CDY12160 | Canola | cytosol | 16.36 | 17.36 |
| CDY23783 | Canola | cytosol | 16.06 | 17.21 |
| CDY36039 | Canola | vacuole | 46.36 | 16.61 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 12.73 | 14.58 |
| CDY37377 | Canola | cytosol, plastid | 21.52 | 14.49 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | UniProt:A0A078HPY3 | EnsemblPlants:CDY39666 | ProteinID:CDY39666 | ProteinID:CDY39666.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00068244001 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | PFAM:PF00917 | PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 | SMART:SM00061 |
| SUPFAM:SSF49599 | SignalP:SignalP-TM | TMHMM:TMhelix | InterPro:TRAF-like | UniParc:UPI0004EE974D | SEG:seg |
Description
BnaA04g13830DBnaA04g13830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPY3]
Coordinates
chrLK032454:-:41409..43194
Molecular Weight (calculated)
38747.3 Da
IEP (calculated)
9.970
GRAVY (calculated)
-0.402
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYHYRNTIS ISVAYLFLCL FITYVSSQSL IRQITDDVNT NLKEDVPYVQ KHQEISSRHY NVSHSKTVTG MRNRRPSTYS YKIETNVVDK FETRPFMVGG
101: YNWILHVYLN GNTKGWWCWL RFALRRNRQV RFRRFCTSRG LRGSQVLHLQ QEREEVLYHP RYGCMAIRCF QHDFGVDVIV PTPFEESETF SISSSSDKYT
201: WTIQKFSTLS KDLYSPVISL GGKKWNILVV PAGSGSGRGK YVSMFLQLST NQRRGYEYIY VRVKFRVINQ SKLSNRESEL RNWYGRTYSW GIVDLISFDD
301: LRDSSKGFLV NDALIVEVQL EAISTTKYFP
101: YNWILHVYLN GNTKGWWCWL RFALRRNRQV RFRRFCTSRG LRGSQVLHLQ QEREEVLYHP RYGCMAIRCF QHDFGVDVIV PTPFEESETF SISSSSDKYT
201: WTIQKFSTLS KDLYSPVISL GGKKWNILVV PAGSGSGRGK YVSMFLQLST NQRRGYEYIY VRVKFRVINQ SKLSNRESEL RNWYGRTYSW GIVDLISFDD
301: LRDSSKGFLV NDALIVEVQL EAISTTKYFP
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.