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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88229 Canola extracellular 96.86 96.86
CDY70520 Canola vacuole 86.57 91.27
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 90.86 90.86
CDX80557 Canola extracellular 90.29 90.29
CDY05532 Canola extracellular 88.29 88.03
CDY24977 Canola extracellular 88.29 88.03
CDX87054 Canola extracellular 87.71 87.71
CDY19775 Canola extracellular 86.86 86.86
CDX81956 Canola extracellular 74.86 85.34
CDY05531 Canola cytosol 72.0 84.28
CDY05324 Canola cytosol 68.29 79.67
AT5G26320.1 Thale cress vacuole 71.71 71.31
CDX87056 Canola extracellular 69.14 70.55
CDY19777 Canola extracellular 69.14 70.35
CDX87055 Canola golgi, plasma membrane 66.29 69.67
CDY19776 Canola extracellular, plasma membrane, vacuole 67.14 67.92
CDY04288 Canola cytosol 13.71 34.29
CDY70350 Canola plastid 16.29 33.33
KRH68153 Soybean cytosol 27.43 30.77
CDY43081 Canola extracellular, vacuole 32.86 30.1
CDY70349 Canola cytosol 22.57 29.92
CDY50084 Canola extracellular, vacuole 32.57 29.84
CDY44083 Canola cytosol 26.86 29.84
CDX82371 Canola cytosol 26.29 29.77
CDX75913 Canola cytosol 26.29 29.77
CDX82246 Canola endoplasmic reticulum, extracellular 32.0 29.71
CDX99123 Canola cytosol 16.29 29.69
CDY04290 Canola extracellular 21.43 29.18
CDY43080 Canola endoplasmic reticulum, vacuole 31.71 29.13
CDY50083 Canola endoplasmic reticulum, vacuole 31.43 28.87
CDX83143 Canola cytosol 26.0 28.44
CDY07338 Canola plastid 24.0 27.81
CDY58708 Canola cytosol, nucleus, plastid 24.29 27.6
CDX82252 Canola plastid 28.29 27.58
CDY36041 Canola plasma membrane 28.0 27.53
CDY39500 Canola cytosol 24.86 27.19
CDX82249 Canola plasma membrane, vacuole 29.71 27.15
CDY07146 Canola cytosol 22.57 26.78
CDY04283 Canola plastid 24.29 26.65
CDY23783 Canola cytosol 23.43 26.62
CDY28571 Canola cytosol 17.14 26.55
CDY50282 Canola endoplasmic reticulum, vacuole 29.14 26.49
CDX82251 Canola extracellular, golgi 30.0 26.32
CDX82248 Canola endoplasmic reticulum, vacuole 32.86 26.14
CDY57407 Canola cytosol 23.14 26.13
CDY07340 Canola plastid 23.71 26.02
CDX95908 Canola plastid 27.14 25.96
CDY36040 Canola extracellular 28.0 25.93
CDY28575 Canola golgi 22.57 25.9
CDY51713 Canola cytosol 21.71 25.76
CDY25415 Canola vacuole 29.71 25.74
CDX91854 Canola cytosol 21.71 25.59
CDY29822 Canola vacuole 29.43 25.56
CDX81648 Canola plastid 20.86 25.52
CDX74378 Canola cytosol 20.86 25.44
CDY12160 Canola cytosol 22.57 25.4
CDY60616 Canola cytosol, mitochondrion, plastid 20.29 24.65
CDX84705 Canola cytosol 21.14 24.18
CDX79503 Canola cytosol 20.86 23.93
CDX74582 Canola extracellular, golgi, plastid 24.57 22.99
CDY34004 Canola cytosol 19.43 22.67
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 23.43 22.1
CDY19307 Canola cytosol 24.29 21.91
CDY39666 Canola endoplasmic reticulum, vacuole 20.57 21.82
CDX91855 Canola extracellular, plasma membrane, vacuole 12.29 21.72
CDY07196 Canola cytosol 18.29 21.55
CDY44084 Canola cytosol 25.71 21.33
CDX86065 Canola cytosol 19.14 21.27
CDY48522 Canola cytosol 16.57 20.79
CDY46265 Canola plasma membrane 24.57 18.3
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 26.57 18.09
CDY29329 Canola plasma membrane 24.0 17.83
CDY37377 Canola cytosol, plastid 24.0 17.14
CDY36039 Canola vacuole 30.0 11.4
Protein Annotations
EnsemblPlants:CDY67361EnsemblPlantsGene:GSBRNA2T00062815001Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likencoils:CoilPANTHER:PTHR26379
PANTHER:PTHR26379:SF214PFAM:PF00917PFscan:PS50144ProteinID:CDY67361ProteinID:CDY67361.1SignalP:SignalP-noTM
SMART:SM00061SUPFAM:SSF49599UniParc:UPI0004EE6E92UniProt:A0A078JNS2MapMan:35.1:
Description
BnaC07g49620DBnaC07g49620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNS2]
Coordinates
chrLK036023:+:1433..3891
Molecular Weight (calculated)
39392.8 Da
IEP (calculated)
9.469
GRAVY (calculated)
-0.253
Length
350 amino acids
Sequence
(BLAST)
001: MDSQKRSLGF LSLAFLFITC SSAEFLIHQV TEGRETENNS SYSLQSNLGV TRVWRDDRPS SKIVTIAGYS VIKGRGEPYE SSVFEAAGYK WRLVLYVTGN
101: KNDGGNGYIS LYVRMEETES LPYGWEVNVD LKLFVHNPKQ HKYLTVTDGA VKRFNAAKKE WGFGQLISLA TFENTNQGYI VQDTCSFGAE ILIVKLANQQ
201: EKVTFISNPP NNVFTWKILR FSNLEDKFYY SADFLVGDRY WRLGFNPKGS GGGRPHALPI FLYAQGFRPN AVATNTWGAV NLRLKNQRSS NHRQLYSAAW
301: YPIRSGYGVG VNNIILMADL KDTSKGYLVN DAIIFEAEMV KVSVTNIAPV
Best Arabidopsis Sequence Match ( AT5G26280.1 )
(BLAST)
001: MNNQKWSIGF ISLAFLFITS SSAEFIIQQV TKGRGIEYNS SYSLEENLGV TRELREERPS SKIVTITSFS VIKGRGEPYE SSVFEAAGYK WRLVLYVNGN
101: KNDGGNDHIS LYARIEETNS LPLGWEVNVD LKLFVHNGKL HKYLTVTDGL VKRYNNAKKE WGFGQLIPRS TFYNANEGYL DQDTGSFGAE IFIVKPAQQQ
201: EKVTFISNPP NNVFTWKILR FSTLEDKFYY SDDFLVEDRY WRLGFNPKGD GGGRPHALPI FLFAQGHKAN AVATNTWGAV NLRLKNQRST NHRQIYSAAW
301: YPIGSGYGVG VNNIILLADL NDASKGYLVN DAIIFEAEMV KVSITNIVSA
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT5G26280]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.