Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05531 | Canola | cytosol | 91.33 | 91.64 |
| CDY70520 | Canola | vacuole | 77.0 | 69.58 |
| CDY24977 | Canola | extracellular | 81.33 | 69.52 |
| CDY05532 | Canola | extracellular | 81.0 | 69.23 |
| CDX88229 | Canola | extracellular | 79.67 | 68.29 |
| CDY67361 | Canola | vacuole | 79.67 | 68.29 |
| CDX80557 | Canola | extracellular | 78.0 | 66.86 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 77.67 | 66.57 |
| CDX87054 | Canola | extracellular | 77.0 | 66.0 |
| CDY19775 | Canola | extracellular | 75.67 | 64.86 |
| CDX81956 | Canola | extracellular | 64.67 | 63.19 |
| CDX87055 | Canola | golgi, plasma membrane | 62.33 | 56.16 |
| AT5G26320.1 | Thale cress | vacuole | 65.67 | 55.97 |
| CDX87056 | Canola | extracellular | 62.0 | 54.23 |
| CDY19777 | Canola | extracellular | 61.33 | 53.49 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 60.67 | 52.6 |
| CDY04288 | Canola | cytosol | 14.33 | 30.71 |
| CDX99123 | Canola | cytosol | 18.67 | 29.17 |
| KRH68153 | Soybean | cytosol | 29.33 | 28.21 |
| CDY70349 | Canola | cytosol | 24.33 | 27.65 |
| CDY70350 | Canola | plastid | 15.67 | 27.49 |
| CDY44083 | Canola | cytosol | 28.0 | 26.67 |
| CDX82371 | Canola | cytosol | 27.33 | 26.54 |
| CDX75913 | Canola | cytosol | 27.33 | 26.54 |
| CDY28571 | Canola | cytosol | 19.67 | 26.11 |
| CDY04290 | Canola | extracellular | 22.0 | 25.68 |
| CDY07338 | Canola | plastid | 25.33 | 25.17 |
| CDX83143 | Canola | cytosol | 26.0 | 24.38 |
| CDY50084 | Canola | extracellular, vacuole | 30.67 | 24.08 |
| CDY43081 | Canola | extracellular, vacuole | 30.67 | 24.08 |
| CDY23783 | Canola | cytosol | 24.67 | 24.03 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 24.67 | 24.03 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 30.33 | 23.88 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 30.0 | 23.87 |
| CDY07146 | Canola | cytosol | 23.33 | 23.73 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 30.0 | 23.62 |
| CDY28575 | Canola | golgi | 24.0 | 23.61 |
| CDX79503 | Canola | cytosol | 24.0 | 23.61 |
| CDX91854 | Canola | cytosol | 23.33 | 23.57 |
| CDX84705 | Canola | cytosol | 24.0 | 23.53 |
| CDX95908 | Canola | plastid | 28.67 | 23.5 |
| CDY39500 | Canola | cytosol | 25.0 | 23.44 |
| CDY51713 | Canola | cytosol | 23.0 | 23.39 |
| CDX74378 | Canola | cytosol | 22.33 | 23.34 |
| CDY04283 | Canola | plastid | 24.33 | 22.88 |
| CDX82252 | Canola | plastid | 27.33 | 22.84 |
| CDY12160 | Canola | cytosol | 23.67 | 22.83 |
| CDX81648 | Canola | plastid | 21.67 | 22.73 |
| CDY07340 | Canola | plastid | 24.0 | 22.57 |
| CDY36041 | Canola | plasma membrane | 26.67 | 22.47 |
| CDY57407 | Canola | cytosol | 23.0 | 22.26 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 21.33 | 22.22 |
| CDX82249 | Canola | plasma membrane, vacuole | 28.33 | 22.19 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 27.67 | 21.56 |
| CDX82251 | Canola | extracellular, golgi | 28.67 | 21.55 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 14.0 | 21.21 |
| CDY29822 | Canola | vacuole | 28.33 | 21.09 |
| CDY25415 | Canola | vacuole | 28.33 | 21.04 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 30.67 | 20.91 |
| CDY36040 | Canola | extracellular | 26.33 | 20.9 |
| CDY07196 | Canola | cytosol | 20.33 | 20.54 |
| CDX74582 | Canola | extracellular, golgi, plastid | 24.67 | 19.79 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 24.33 | 19.68 |
| CDY48522 | Canola | cytosol | 18.0 | 19.35 |
| CDY34004 | Canola | cytosol | 19.33 | 19.33 |
| CDY19307 | Canola | cytosol | 24.67 | 19.07 |
| CDX86065 | Canola | cytosol | 19.67 | 18.73 |
| CDY44084 | Canola | cytosol | 26.33 | 18.72 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 19.33 | 17.58 |
| CDY46265 | Canola | plasma membrane | 23.33 | 14.89 |
| CDY29329 | Canola | plasma membrane | 22.67 | 14.44 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.67 | 14.4 |
| CDY37377 | Canola | cytosol, plastid | 22.67 | 13.88 |
| CDY36039 | Canola | vacuole | 28.0 | 9.12 |
Protein Annotations
| EnsemblPlants:CDY05324 | EnsemblPlantsGene:GSBRNA2T00120158001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF214 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY05324 | ProteinID:CDY05324.1 | SMART:SM00061 | SUPFAM:SSF49599 |
| UniParc:UPI0004EE1B4E | MapMan:35.2 | : | : | : | : |
Description
BnaC02g40320D
Coordinates
chrLK031961:+:26555..28154
Molecular Weight (calculated)
34186.6 Da
IEP (calculated)
6.376
GRAVY (calculated)
-0.219
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYTETQYLL TGVTRVLREE RPSSKIVTIA GYSVIKGRGE PYESSVFEAA GYKWRLVLHV GNAGYISLYL RIEEAESIPY GLEVNVDLKL FVHVPKLDKY
101: LTITDGAVKR FNTEKKEWGF EQLIDLASFE NTNEGYIVQD TCSFGAEIFI VKPAKVQEKV TFISNPPRNV FTWEIPHFSD MGDKFYYSDD FLVGDRYWRL
201: GFNPKSGSAL PIYLYAQGFR PDAVTTNTWG AVNLRLKNQR STNHRERYSW YPIRSDYGVG VNSIISLADL HDASKGYLVN DAIIFEAEMV KVTVTNIVSV
101: LTITDGAVKR FNTEKKEWGF EQLIDLASFE NTNEGYIVQD TCSFGAEIFI VKPAKVQEKV TFISNPPRNV FTWEIPHFSD MGDKFYYSDD FLVGDRYWRL
201: GFNPKSGSAL PIYLYAQGFR PDAVTTNTWG AVNLRLKNQR STNHRERYSW YPIRSDYGVG VNSIISLADL HDASKGYLVN DAIIFEAEMV KVTVTNIVSV
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.