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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX81956 Canola extracellular 83.13 89.9
CDX80557 Canola extracellular 92.17 87.43
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 91.87 87.14
CDY67361 Canola vacuole 91.27 86.57
CDX88229 Canola extracellular 90.66 86.0
CDX87054 Canola extracellular 87.35 82.86
CDY19775 Canola extracellular 86.45 82.0
CDY05532 Canola extracellular 86.45 81.77
CDY24977 Canola extracellular 86.45 81.77
CDY05531 Canola cytosol 72.59 80.6
CDY05324 Canola cytosol 69.58 77.0
AT5G26320.1 Thale cress vacuole 73.49 69.32
CDX87056 Canola extracellular 70.78 68.51
CDY19777 Canola extracellular 70.78 68.31
CDX87055 Canola golgi, plasma membrane 66.57 66.37
CDY19776 Canola extracellular, plasma membrane, vacuole 67.17 64.45
CDX99123 Canola cytosol 17.77 30.73
CDY04288 Canola cytosol 12.35 29.29
KRH68153 Soybean cytosol 26.51 28.21
CDX82371 Canola cytosol 25.9 27.83
CDX75913 Canola cytosol 25.9 27.83
CDY50084 Canola extracellular, vacuole 31.02 26.96
CDY43081 Canola extracellular, vacuole 31.02 26.96
CDY70350 Canola plastid 13.86 26.9
CDX82246 Canola endoplasmic reticulum, extracellular 30.42 26.79
CDY70349 Canola cytosol 21.08 26.52
CDY43080 Canola endoplasmic reticulum, vacuole 30.12 26.25
CDY28571 Canola cytosol 17.77 26.11
CDY50083 Canola endoplasmic reticulum, vacuole 29.82 25.98
CDY44083 Canola cytosol 24.4 25.71
CDY23783 Canola cytosol 23.49 25.32
CDX91854 Canola cytosol 22.59 25.25
CDX74378 Canola cytosol 21.69 25.09
CDY07146 Canola cytosol 22.29 25.08
CDX83143 Canola cytosol 24.1 25.0
CDY04290 Canola extracellular 19.28 24.9
CDX84705 Canola cytosol 22.89 24.84
CDX79503 Canola cytosol 22.59 24.59
CDX82249 Canola plasma membrane, vacuole 28.31 24.54
CDY51713 Canola cytosol 21.39 24.07
CDX82252 Canola plastid 25.9 23.96
CDY12160 Canola cytosol 22.29 23.79
CDY58708 Canola cytosol, nucleus, plastid 21.99 23.7
CDY60616 Canola cytosol, mitochondrion, plastid 20.48 23.61
CDY36041 Canola plasma membrane 25.3 23.6
CDY25415 Canola vacuole 28.61 23.51
CDY07338 Canola plastid 21.39 23.51
CDX82248 Canola endoplasmic reticulum, vacuole 31.02 23.41
CDY50282 Canola endoplasmic reticulum, vacuole 27.11 23.38
CDY29822 Canola vacuole 28.31 23.33
CDX82251 Canola extracellular, golgi 28.01 23.31
CDX91855 Canola extracellular, plasma membrane, vacuole 13.86 23.23
CDX95908 Canola plastid 25.6 23.22
CDY39500 Canola cytosol 22.29 23.12
CDY36040 Canola extracellular 25.9 22.75
CDY07340 Canola plastid 21.39 22.26
CDX81648 Canola plastid 18.98 22.03
CDY04283 Canola plastid 21.08 21.94
CDY57407 Canola cytosol 20.48 21.94
CDY07196 Canola cytosol 19.58 21.89
CDY28575 Canola golgi 19.88 21.64
CDX86065 Canola cytosol 20.48 21.59
CDY48522 Canola cytosol 17.77 21.15
CDY39666 Canola endoplasmic reticulum, vacuole 20.48 20.61
CDX74582 Canola extracellular, golgi, plastid 23.19 20.59
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 22.29 19.95
CDY34004 Canola cytosol 17.17 19.0
CDY19307 Canola cytosol 21.69 18.56
CDY44084 Canola cytosol 23.19 18.25
CDY46265 Canola plasma membrane 23.19 16.38
CDY29329 Canola plasma membrane 22.29 15.71
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 23.8 15.37
CDY37377 Canola cytosol, plastid 21.99 14.9
CDY36039 Canola vacuole 28.31 10.21
Protein Annotations
EnsemblPlants:CDY70520EnsemblPlantsGene:GSBRNA2T00003957001Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likePANTHER:PTHR26379PANTHER:PTHR26379:SF214
PFAM:PF00917PFscan:PS50144PFscan:PS51257ProteinID:CDY70520ProteinID:CDY70520.1SignalP:SignalP-noTM
SMART:SM00061SUPFAM:SSF49599UniParc:UPI0004EEC346UniProt:A0A078JVP2MapMan:35.2:
Description
BnaA09g56140DBnaA09g56140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVP2]
Coordinates
chrLK042374:-:23..1505
Molecular Weight (calculated)
37574.8 Da
IEP (calculated)
9.044
GRAVY (calculated)
-0.214
Length
332 amino acids
Sequence
(BLAST)
001: MDGQKWSLGL ISLAFLFIAC SSAELLIQQV TRGRGTEINS SYSLEANLGV TRVLRDERPS SKIVTIAGYS VIKERHEPYE SSVFEAAGYK WRLVLYVTET
101: ESLPYGWEVN VDLKLFVHNP KQHKYLAVTD GAVKRFNAAK KEWGFGQLIS LATFQNTNQG YIVQDTCSFG AEILIVKPAE QQEKVTFISN PPNNVFTWKI
201: LRFSSLEDKF YYSDDFLVGD RYWRLGFNPK GDGEGRPHAL PIYLYAQGFR PNAVATNTWG AVNLRLKNQR SSNHRQLYSA AWYPIRSDYG VGVNNIILMK
301: DLKDTSKGYL VNDAIIFEAE IVKVSVTNIV PV
Best Arabidopsis Sequence Match ( AT5G26280.2 )
(BLAST)
001: MNNQKWSIGF ISLAFLFITS SSAEFIIQQV TKGRGIEYNS SYSLEENLGV TRELREERPS SKIVTITSFS VIKGRGEPYE SSVFEAAGYK WIEETNSLPL
101: GWEVNVDLKL FVHNGKLHKY LTVTDGLVKR YNNAKKEWGF GQLIPRSTFY NANEGYLDQD TGSFGAEIFI VKPAQQQEKV TFISNPPNNV FTWKILRFST
201: LEDKFYYSDD FLVEDRYWRL GFNPKGDGGG RPHALPIFLF AQGHKANAVA TNTWGAVNLR LKNQRSTNHR QIYSAAWYPI GSGYGVGVNN IILLADLNDA
301: SKGYLVNDAI IFEAEMVKVS ITNIVSA
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT5G26280]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.