Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82249 | Canola | plasma membrane, vacuole | 40.61 | 97.65 |
| CDX82251 | Canola | extracellular, golgi | 33.88 | 78.2 |
| CDY36040 | Canola | extracellular | 29.53 | 71.96 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 29.64 | 70.91 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 26.6 | 64.3 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 26.6 | 64.3 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 26.06 | 63.32 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 25.73 | 62.86 |
| CDY43081 | Canola | extracellular, vacuole | 25.62 | 61.78 |
| CDY50084 | Canola | extracellular, vacuole | 25.08 | 60.47 |
| CDY29822 | Canola | vacuole | 25.84 | 59.06 |
| CDY25415 | Canola | vacuole | 25.3 | 57.67 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 27.04 | 56.59 |
| CDX82252 | Canola | plastid | 21.82 | 55.99 |
| CDX83143 | Canola | cytosol | 19.33 | 55.62 |
| CDY36041 | Canola | plasma membrane | 21.28 | 55.06 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 20.09 | 49.33 |
| CDY34004 | Canola | cytosol | 15.53 | 47.67 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 16.61 | 46.36 |
| CDY04288 | Canola | cytosol | 6.95 | 45.71 |
| CDY70350 | Canola | plastid | 8.25 | 44.44 |
| CDY44083 | Canola | cytosol | 14.55 | 42.54 |
| CDY70349 | Canola | cytosol | 12.16 | 42.42 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 13.25 | 39.61 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.04 | 39.49 |
| CDY28571 | Canola | cytosol | 9.66 | 39.38 |
| CDX99123 | Canola | cytosol | 8.14 | 39.06 |
| CDY28575 | Canola | golgi | 12.6 | 38.03 |
| CDY07338 | Canola | plastid | 12.38 | 37.75 |
| CDY04290 | Canola | extracellular | 10.53 | 37.74 |
| CDX95908 | Canola | plastid | 14.98 | 37.7 |
| CDY07340 | Canola | plastid | 12.92 | 37.3 |
| CDY04283 | Canola | plastid | 12.81 | 36.99 |
| CDY39500 | Canola | cytosol | 12.81 | 36.88 |
| CDY57407 | Canola | cytosol | 12.27 | 36.45 |
| CDX81648 | Canola | plastid | 11.07 | 35.66 |
| CDX74582 | Canola | extracellular, golgi, plastid | 14.33 | 35.29 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 13.79 | 34.23 |
| CDX87055 | Canola | golgi, plasma membrane | 11.84 | 32.73 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 12.16 | 32.37 |
| CDX82371 | Canola | cytosol | 10.75 | 32.04 |
| CDY44084 | Canola | cytosol | 14.66 | 31.99 |
| CDY29329 | Canola | plasma membrane | 15.96 | 31.21 |
| CDY19775 | Canola | extracellular | 11.73 | 30.86 |
| CDX87054 | Canola | extracellular | 11.73 | 30.86 |
| CDY46265 | Canola | plasma membrane | 15.74 | 30.85 |
| CDX86065 | Canola | cytosol | 10.53 | 30.79 |
| CDX75913 | Canola | cytosol | 10.31 | 30.74 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 11.62 | 30.57 |
| CDX80557 | Canola | extracellular | 11.51 | 30.29 |
| CDY24977 | Canola | extracellular | 11.51 | 30.2 |
| CDY05532 | Canola | extracellular | 11.51 | 30.2 |
| CDY19307 | Canola | cytosol | 12.7 | 30.15 |
| CDX87056 | Canola | extracellular | 11.18 | 30.03 |
| CDY67361 | Canola | vacuole | 11.4 | 30.0 |
| CDY19777 | Canola | extracellular | 11.18 | 29.94 |
| CDX88229 | Canola | extracellular | 11.18 | 29.43 |
| CDY05531 | Canola | cytosol | 9.45 | 29.1 |
| CDY70520 | Canola | vacuole | 10.21 | 28.31 |
| KRH68153 | Soybean | cytosol | 9.55 | 28.21 |
| CDY05324 | Canola | cytosol | 9.12 | 28.0 |
| CDX74378 | Canola | cytosol | 8.58 | 27.53 |
| CDX91854 | Canola | cytosol | 8.79 | 27.27 |
| CDX81956 | Canola | extracellular | 8.79 | 26.38 |
| CDY37377 | Canola | cytosol, plastid | 13.68 | 25.71 |
| CDY07146 | Canola | cytosol | 7.93 | 24.75 |
| CDY51713 | Canola | cytosol | 7.71 | 24.07 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 5.1 | 23.74 |
| CDY07196 | Canola | cytosol | 7.49 | 23.23 |
| CDX79503 | Canola | cytosol | 7.49 | 22.62 |
| CDY48522 | Canola | cytosol | 6.73 | 22.22 |
| CDX84705 | Canola | cytosol | 7.17 | 21.57 |
| CDY23783 | Canola | cytosol | 7.17 | 21.43 |
| CDY12160 | Canola | cytosol | 6.84 | 20.26 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 5.65 | 18.06 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | UniProt:A0A078HF73 | EnsemblPlants:CDY36039 | ProteinID:CDY36039 | ProteinID:CDY36039.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00059852001 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | PFAM:PF00917 | PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 | SMART:SM00061 |
| SUPFAM:SSF49599 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:TRAF-like | UniParc:UPI0004EEEAE3 | SEG:seg |
Description
BnaC03g41590DBnaC03g41590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF73]
Coordinates
chrLK032366:-:40375..49343
Molecular Weight (calculated)
106552.0 Da
IEP (calculated)
7.103
GRAVY (calculated)
-0.367
Length
921 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSHYTNIIY VVFLLFCLLI TSSSAQSLIR QPTDDLTTIL QQEKGAQPNS ILGEAHYLNK DDLDISSRDY KGSPSNLVTG MRDRPPMSYS LRMESFNTLL
101: QSNETERYES RPFPVGGYNW SLIVYPNGNR QDSGSGFISL YVAIDNSTLV SSHQEVFADL RFYVFKRTER NFFTVQDTDV WRYNIFKTMW GFPRVLPLDT
201: FRNPSNGYLF DGDNCEFGVD VTVHSPFESS ELFTVSRNFP NPRFTWTIQR FSTLVGDTHL SNTFSVGGRN WNIQVNPRGR STGAGRAMSM YLILNANEKV
301: RPNEKIYVRA RLRVINQRIF SLLWTTIERP IDHWFTTPGL GWGYDEFISL DDLRDFWKGY VMGDVLIVEV EMEAISSTKY FPKGFKEVST WISHHTDVQG
401: TVRFRDGYQE KDIHDEIQDT KGISSVCYLQ GWSSPSIQDF GNLSKSEVYI WTSDHGRWID SEHIRMAPNR RFPHSHEISS YLNESAVIGT DWVMVMEHIR
501: LWRTYSFLLF CLLISSMNSL RVSVFYYCWC LLLCSLYSQS SCKMTSHYGN TISIVSLLFC LYITSASARS FIRQYTDDVN TNLQQWSRTK PKPGREANYE
601: DKYEEISSRD YKVSASNAVK GLRDRPPSSY ILKMESFNTL LKSNYAERYE SRPFADGGYN WYVTLVVYPN GNKKDSGSGY LSLYVAIDNS TLVAAHQEVL
701: ADLRFYIFNN NERKYFTIQD TTVWRFNVFK TMWGFSQVLP VDTFKDPKNG YLYDGDHCEF GVDVIIPSIA ENSELFSATE KFYNPTFTWT IRGFSTLLKD
801: MYSSDVFTIG GRSWNIQVYP NGRGEGEGKF LSMFLKLNGE ETLRPYEKVY VRAKLRVLNQ SKLNNVQNQL DSWFSRAAPS WGFRKFISFD DLRDSSKGFL
901: VNDVLMVQVE MEAVSSTKYF P
101: QSNETERYES RPFPVGGYNW SLIVYPNGNR QDSGSGFISL YVAIDNSTLV SSHQEVFADL RFYVFKRTER NFFTVQDTDV WRYNIFKTMW GFPRVLPLDT
201: FRNPSNGYLF DGDNCEFGVD VTVHSPFESS ELFTVSRNFP NPRFTWTIQR FSTLVGDTHL SNTFSVGGRN WNIQVNPRGR STGAGRAMSM YLILNANEKV
301: RPNEKIYVRA RLRVINQRIF SLLWTTIERP IDHWFTTPGL GWGYDEFISL DDLRDFWKGY VMGDVLIVEV EMEAISSTKY FPKGFKEVST WISHHTDVQG
401: TVRFRDGYQE KDIHDEIQDT KGISSVCYLQ GWSSPSIQDF GNLSKSEVYI WTSDHGRWID SEHIRMAPNR RFPHSHEISS YLNESAVIGT DWVMVMEHIR
501: LWRTYSFLLF CLLISSMNSL RVSVFYYCWC LLLCSLYSQS SCKMTSHYGN TISIVSLLFC LYITSASARS FIRQYTDDVN TNLQQWSRTK PKPGREANYE
601: DKYEEISSRD YKVSASNAVK GLRDRPPSSY ILKMESFNTL LKSNYAERYE SRPFADGGYN WYVTLVVYPN GNKKDSGSGY LSLYVAIDNS TLVAAHQEVL
701: ADLRFYIFNN NERKYFTIQD TTVWRFNVFK TMWGFSQVLP VDTFKDPKNG YLYDGDHCEF GVDVIIPSIA ENSELFSATE KFYNPTFTWT IRGFSTLLKD
801: MYSSDVFTIG GRSWNIQVYP NGRGEGEGKF LSMFLKLNGE ETLRPYEKVY VRAKLRVLNQ SKLNNVQNQL DSWFSRAAPS WGFRKFISFD DLRDSSKGFL
901: VNDVLMVQVE MEAVSSTKYF P
001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
Arabidopsis Description
AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.