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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003989.1-P Field mustard plastid 76.82 80.0
CDY04290 Canola extracellular 63.91 75.1
CDY70350 Canola plastid 41.06 72.51
CDY04283 Canola plastid 70.53 66.77
CDY07340 Canola plastid 69.54 65.83
CDY70349 Canola cytosol 57.28 65.53
CDY44083 Canola cytosol 66.56 63.81
CDY58708 Canola cytosol, nucleus, plastid 63.58 62.34
CDX81648 Canola plastid 57.62 60.84
CDY28575 Canola golgi 60.6 60.0
CDY04288 Canola cytosol 27.48 59.29
CDX95908 Canola plastid 69.87 57.65
CDY28571 Canola cytosol 41.72 55.75
CDY57407 Canola cytosol 50.66 49.35
CDY44084 Canola cytosol 68.87 49.29
CDY39500 Canola cytosol 50.0 47.19
CDY19307 Canola cytosol 50.33 39.18
CDX83143 Canola cytosol 39.07 36.88
CDX82252 Canola plastid 39.74 33.43
CDX82246 Canola endoplasmic reticulum, extracellular 41.39 33.16
CDY36041 Canola plasma membrane 38.74 32.87
CDY43081 Canola extracellular, vacuole 41.06 32.46
CDX99123 Canola cytosol 20.53 32.29
CDY50083 Canola endoplasmic reticulum, vacuole 40.73 32.28
CDY43080 Canola endoplasmic reticulum, vacuole 40.73 32.28
CDY50084 Canola extracellular, vacuole 40.4 31.94
CDY34004 Canola cytosol 30.13 30.33
CDX82249 Canola plasma membrane, vacuole 37.42 29.5
KRH68153 Soybean cytosol 30.13 29.17
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 35.76 29.11
CDY50282 Canola endoplasmic reticulum, vacuole 36.76 28.83
CDY25415 Canola vacuole 38.41 28.71
CDX82251 Canola extracellular, golgi 37.42 28.32
CDY29822 Canola vacuole 37.75 28.29
CDX82248 Canola endoplasmic reticulum, vacuole 41.06 28.18
CDX75913 Canola cytosol 28.48 27.83
CDX82371 Canola cytosol 28.48 27.83
CDX74582 Canola extracellular, golgi, plastid 33.44 27.01
CDY05531 Canola cytosol 25.83 26.09
CDY37377 Canola cytosol, plastid 42.05 25.92
CDX86065 Canola cytosol 26.82 25.71
CDY39666 Canola endoplasmic reticulum, vacuole 27.81 25.45
CDY05324 Canola cytosol 25.17 25.33
CDY36040 Canola extracellular 31.46 25.13
CDY67361 Canola vacuole 27.81 24.0
CDX91854 Canola cytosol 23.51 23.91
CDX88229 Canola extracellular 27.48 23.71
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 27.48 23.71
CDX87056 Canola extracellular 26.82 23.62
CDY19777 Canola extracellular 26.82 23.55
CDX87055 Canola golgi, plasma membrane 25.83 23.42
CDY24977 Canola extracellular 27.15 23.36
CDX80557 Canola extracellular 26.82 23.14
CDY05532 Canola extracellular 26.82 23.08
CDX87054 Canola extracellular 26.49 22.86
CDX74378 Canola cytosol 21.52 22.65
CDY19775 Canola extracellular 26.16 22.57
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 38.41 22.57
CDY19776 Canola extracellular, plasma membrane, vacuole 25.83 22.54
CDY07146 Canola cytosol 21.85 22.37
CDX79503 Canola cytosol 22.19 21.97
CDX81956 Canola extracellular 22.19 21.82
CDY51713 Canola cytosol 21.19 21.69
CDY46265 Canola plasma membrane 33.44 21.49
CDY70520 Canola vacuole 23.51 21.39
CDX84705 Canola cytosol 21.52 21.24
CDY29329 Canola plasma membrane 33.11 21.23
CDX91855 Canola extracellular, plasma membrane, vacuole 13.91 21.21
CDY07196 Canola cytosol 20.53 20.88
CDY48522 Canola cytosol 19.21 20.79
CDY23783 Canola cytosol 18.87 18.51
CDY12160 Canola cytosol 18.21 17.68
CDY60616 Canola cytosol, mitochondrion, plastid 16.23 17.01
CDY36039 Canola vacuole 37.75 12.38
Protein Annotations
EnsemblPlants:CDY07338EnsemblPlantsGene:GSBRNA2T00124290001Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likePANTHER:PTHR26379PANTHER:PTHR26379:SF213
PFAM:PF00917PFscan:PS50144ProteinID:CDY07338ProteinID:CDY07338.1SEG:segSMART:SM00061
SUPFAM:SSF49599UniParc:UPI0004EE47B5UniProt:A0A078F6P1MapMan:35.2::
Description
BnaA07g24170DBnaA07g24170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6P1]
Coordinates
chrLK031978:+:851..2922
Molecular Weight (calculated)
35097.6 Da
IEP (calculated)
7.447
GRAVY (calculated)
-0.384
Length
302 amino acids
Sequence
(BLAST)
001: MGSSSTEVST IVKNWREHPP ASYSLKIHSF SQFENSSSSS DDKYQSRLFS SGRYKWYVLI VYPKGNEKDN GSGFISMYVE IDSKSLMVFT PPTEVFAEIR
101: FFIYNKKENK YFTIQDVEVK RFNALKTVWG LEQILPCHCE FGVDVIVAPP LTYWEILSFT EKYSDPKFSC AIKNFSQFKE NVYTPNSFSM AGKKWVLMVY
201: PKGDSRADGK CLSIFLYLDD CDKPKDDEKI FVQANFRVLD PLGSNHFQHK FEKWYTEQNT AWGWPLFLSL AELQKSYLDK QDTLKVEIEF KVVSATKYSP
301: II
Best Arabidopsis Sequence Match ( AT1G69650.1 )
(BLAST)
001: MGASCSAPVS STIKKNWRDH PPSSYSLKIH NFSQLEKTTS FSGHKYQSRL FSSGDITGNV KDNGSGFISM YVELDSSSLM ESKPPTEVFA ELRFFVYNKK
101: QNKYFTKDVE IKRFDALKMV WGLPKGNECE FGVDVIVAPP LTNWEILSFH DEKLSYPKVT WSVKNFSQWK ENECSKPNRF SIGGREWVLK LFPKGNSRAK
201: GKYLSVFLYL ADNETLKPDE KIFTQVVVRI LNPLGSNHVA SRLNYWHKGS NFGYGWCKFL SLDKIRKTYL DKEDTLMIEA EFEVVSATKF STII
Arabidopsis Description
TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9FWZ3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.