Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039646.1-P | Field mustard | plastid | 92.36 | 98.19 |
| CDY46265 | Canola | plasma membrane | 97.24 | 97.45 |
| CDX74582 | Canola | extracellular, golgi, plastid | 60.3 | 75.94 |
| CDX99123 | Canola | cytosol | 18.26 | 44.79 |
| CDX83143 | Canola | cytosol | 26.11 | 38.44 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 30.15 | 38.27 |
| CDY70349 | Canola | cytosol | 21.02 | 37.5 |
| CDY04288 | Canola | cytosol | 11.04 | 37.14 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 29.09 | 36.34 |
| CDX82252 | Canola | plastid | 27.18 | 35.65 |
| CDY44083 | Canola | cytosol | 23.78 | 35.56 |
| CDY70350 | Canola | plastid | 12.74 | 35.09 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 28.03 | 34.65 |
| CDY04290 | Canola | extracellular | 18.9 | 34.63 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 27.81 | 34.38 |
| CDY36041 | Canola | plasma membrane | 25.9 | 34.27 |
| CDY28575 | Canola | golgi | 22.08 | 34.1 |
| CDY43081 | Canola | extracellular, vacuole | 27.6 | 34.03 |
| CDY34004 | Canola | cytosol | 21.66 | 34.0 |
| CDX86065 | Canola | cytosol | 22.51 | 33.65 |
| CDY28571 | Canola | cytosol | 16.14 | 33.63 |
| CDX82249 | Canola | plasma membrane, vacuole | 27.18 | 33.42 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 21.66 | 33.12 |
| CDY07338 | Canola | plastid | 21.23 | 33.11 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 26.96 | 32.99 |
| CDY50084 | Canola | extracellular, vacuole | 26.75 | 32.98 |
| CDY07340 | Canola | plastid | 22.29 | 32.92 |
| CDY04283 | Canola | plastid | 22.29 | 32.92 |
| CDX82251 | Canola | extracellular, golgi | 27.6 | 32.58 |
| CDY29822 | Canola | vacuole | 27.81 | 32.51 |
| CDY57407 | Canola | cytosol | 21.23 | 32.26 |
| CDX95908 | Canola | plastid | 25.05 | 32.24 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 29.94 | 32.05 |
| CDY25415 | Canola | vacuole | 27.39 | 31.93 |
| CDY39500 | Canola | cytosol | 21.23 | 31.25 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 21.66 | 30.91 |
| KRH68153 | Soybean | cytosol | 19.96 | 30.13 |
| CDX82371 | Canola | cytosol | 19.53 | 29.77 |
| CDY36040 | Canola | extracellular | 23.78 | 29.63 |
| CDX75913 | Canola | cytosol | 19.32 | 29.45 |
| CDX81648 | Canola | plastid | 17.2 | 28.32 |
| CDX87055 | Canola | golgi, plasma membrane | 18.9 | 26.73 |
| CDY44084 | Canola | cytosol | 23.14 | 25.83 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 18.9 | 25.72 |
| CDY19307 | Canola | cytosol | 21.02 | 25.52 |
| CDX79503 | Canola | cytosol | 16.14 | 24.92 |
| CDX84705 | Canola | cytosol | 16.14 | 24.84 |
| CDY07146 | Canola | cytosol | 15.29 | 24.41 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 10.19 | 24.24 |
| CDY12160 | Canola | cytosol | 15.92 | 24.12 |
| CDY05531 | Canola | cytosol | 15.29 | 24.08 |
| CDY23783 | Canola | cytosol | 15.71 | 24.03 |
| CDY67361 | Canola | vacuole | 17.83 | 24.0 |
| CDX88229 | Canola | extracellular | 17.83 | 24.0 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.11 | 23.93 |
| CDX87054 | Canola | extracellular | 17.62 | 23.71 |
| CDY19775 | Canola | extracellular | 17.62 | 23.71 |
| CDX87056 | Canola | extracellular | 17.2 | 23.62 |
| CDX91854 | Canola | cytosol | 14.86 | 23.57 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.41 | 23.43 |
| CDY51713 | Canola | cytosol | 14.65 | 23.39 |
| CDX74378 | Canola | cytosol | 14.23 | 23.34 |
| CDY19777 | Canola | extracellular | 16.99 | 23.26 |
| CDX80557 | Canola | extracellular | 17.2 | 23.14 |
| CDY05324 | Canola | cytosol | 14.44 | 22.67 |
| CDY70520 | Canola | vacuole | 15.71 | 22.29 |
| CDY05532 | Canola | extracellular | 16.56 | 22.22 |
| CDY07196 | Canola | cytosol | 14.01 | 22.22 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 13.59 | 22.22 |
| CDY24977 | Canola | extracellular | 16.56 | 22.22 |
| CDX81956 | Canola | extracellular | 14.01 | 21.5 |
| CDY37377 | Canola | cytosol, plastid | 22.29 | 21.43 |
| CDY48522 | Canola | cytosol | 12.1 | 20.43 |
| CDY36039 | Canola | vacuole | 31.21 | 15.96 |
Protein Annotations
| EnsemblPlants:CDY29329 | EnsemblPlantsGene:GSBRNA2T00042890001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY29329 | ProteinID:CDY29329.1 | SMART:SM00061 | SUPFAM:SSF49599 |
| TMHMM:TMhelix | UniParc:UPI0004EEC405 | UniProt:A0A078GVY8 | MapMan:35.2 | : | : |
Description
BnaA05g15960DBnaA05g15960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVY8]
Coordinates
chrLK032235:-:126268..129197
Molecular Weight (calculated)
53540.0 Da
IEP (calculated)
5.584
GRAVY (calculated)
-0.350
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLNEKRNLN LNGAIFLFSS FFCAGFATMQ VSLVPTKGTN SAVPCNPQSS RLAVINGAEP RLSAEQKFMR TRPPSAYCVR IESCSELMTR SPNLQYETRP
101: FSVGGFNWTF ILQPFGNKTS VGDWISAYVA IDPSGLVGEN REVYADLRFL VYSKSKDQYW TSMDTEIRHF HQFRTTWGSP NFIQTKQFKA KDKEYIFDDD
201: QCVFGVDISV YPYFNQWEIL SIDKTVYGPN SWKLMKFSTL TRDFYISDDF SVGGKNWAFK VYPNGNGTGE GNSLSLYVIL SENQILKTYE KVYVRAKLRV
301: LDQKQSKHLQ KPILSWFDTP GEGSGFEQFV SFTDLQNPAK GFIVDDSLTV QVQFEATSST NYYSANAAQL MSNFFSIGLS DTTDALTFTF GDSQVQENLN
401: FEDISDDVYV QQLSAECVVK RRVEKLVSRK LSRTEASSSS VEINTDQSNS MVMMTSKILT FTTEREQKQQ I
101: FSVGGFNWTF ILQPFGNKTS VGDWISAYVA IDPSGLVGEN REVYADLRFL VYSKSKDQYW TSMDTEIRHF HQFRTTWGSP NFIQTKQFKA KDKEYIFDDD
201: QCVFGVDISV YPYFNQWEIL SIDKTVYGPN SWKLMKFSTL TRDFYISDDF SVGGKNWAFK VYPNGNGTGE GNSLSLYVIL SENQILKTYE KVYVRAKLRV
301: LDQKQSKHLQ KPILSWFDTP GEGSGFEQFV SFTDLQNPAK GFIVDDSLTV QVQFEATSST NYYSANAAQL MSNFFSIGLS DTTDALTFTF GDSQVQENLN
401: FEDISDDVYV QQLSAECVVK RRVEKLVSRK LSRTEASSSS VEINTDQSNS MVMMTSKILT FTTEREQKQQ I
001: MYSEEKKSRN YGSIFVYCFF CFVLIVEVAR FAKPYINLQN LIETEAVVEE GFMAVGNSGN LPCGSSKPSS ASVRAHDEQK LSQAVTTDTR TRPPNSYCVK
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST
Arabidopsis Description
ZW9At1g58270/F19C14_8 [Source:UniProtKB/TrEMBL;Acc:Q9SLV3]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.