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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003990.1-P Field mustard plastid 93.1 99.0
CDY04283 Canola plastid 95.61 95.61
CDY04290 Canola extracellular 60.19 74.71
CDY07338 Canola plastid 65.83 69.54
CDY70350 Canola plastid 36.36 67.84
CDY44083 Canola cytosol 60.5 61.27
CDY04288 Canola cytosol 25.71 58.57
CDY70349 Canola cytosol 48.28 58.33
CDY28575 Canola golgi 55.49 58.03
CDY58708 Canola cytosol, nucleus, plastid 54.55 56.49
CDX81648 Canola plastid 49.84 55.59
CDY28571 Canola cytosol 38.56 54.42
CDX95908 Canola plastid 61.76 53.83
CDY57407 Canola cytosol 47.02 48.39
CDY44084 Canola cytosol 63.01 47.63
CDY39500 Canola cytosol 42.63 42.5
CDY19307 Canola cytosol 42.32 34.79
CDX83143 Canola cytosol 34.48 34.38
CDY36041 Canola plasma membrane 38.24 34.27
CDX82252 Canola plastid 38.56 34.26
CDY43081 Canola extracellular, vacuole 39.19 32.72
CDY43080 Canola endoplasmic reticulum, vacuole 38.87 32.55
CDY50083 Canola endoplasmic reticulum, vacuole 38.87 32.55
CDX82246 Canola endoplasmic reticulum, extracellular 38.24 32.36
CDY50084 Canola extracellular, vacuole 38.56 32.2
CDX99123 Canola cytosol 18.5 30.73
CDX82249 Canola plasma membrane, vacuole 36.36 30.29
CDY34004 Canola cytosol 27.9 29.67
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 34.48 29.65
CDX82251 Canola extracellular, golgi 36.36 29.07
CDX74582 Canola extracellular, golgi, plastid 33.54 28.61
CDY50282 Canola endoplasmic reticulum, vacuole 34.48 28.57
KRH68153 Soybean cytosol 27.9 28.53
CDY25415 Canola vacuole 36.05 28.47
CDY29822 Canola vacuole 35.11 27.79
CDX82248 Canola endoplasmic reticulum, vacuole 38.24 27.73
CDY37377 Canola cytosol, plastid 41.69 27.14
CDX75913 Canola cytosol 26.02 26.86
CDX82371 Canola cytosol 26.02 26.86
CDX86065 Canola cytosol 26.33 26.67
CDY39666 Canola endoplasmic reticulum, vacuole 26.33 25.45
CDY36040 Canola extracellular 29.47 24.87
CDY05531 Canola cytosol 22.88 24.41
CDY05324 Canola cytosol 22.57 24.0
CDX91854 Canola cytosol 22.26 23.91
CDY67361 Canola vacuole 26.02 23.71
CDX74378 Canola cytosol 21.32 23.69
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 25.71 23.43
CDY24977 Canola extracellular 25.71 23.36
CDX88229 Canola extracellular 25.39 23.14
CDY05532 Canola extracellular 25.39 23.08
CDX87056 Canola extracellular 24.76 23.03
CDY19777 Canola extracellular 24.76 22.97
CDX87054 Canola extracellular 25.08 22.86
CDY19775 Canola extracellular 24.76 22.57
CDX80557 Canola extracellular 24.76 22.57
CDY46265 Canola plasma membrane 32.92 22.34
CDY29329 Canola plasma membrane 32.92 22.29
CDY07196 Canola cytosol 20.69 22.22
CDX87055 Canola golgi, plasma membrane 23.2 22.22
CDX91855 Canola extracellular, plasma membrane, vacuole 13.79 22.22
CDY07146 Canola cytosol 20.38 22.03
CDX84705 Canola cytosol 20.69 21.57
CDY48522 Canola cytosol 18.81 21.51
CDY19776 Canola extracellular, plasma membrane, vacuole 23.2 21.39
CDY70520 Canola vacuole 22.26 21.39
CDY51713 Canola cytosol 19.75 21.36
CDX79503 Canola cytosol 20.38 21.31
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 34.17 21.21
CDX81956 Canola extracellular 20.38 21.17
CDY12160 Canola cytosol 19.44 19.94
CDY23783 Canola cytosol 19.12 19.81
CDY60616 Canola cytosol, mitochondrion, plastid 16.93 18.75
CDY36039 Canola vacuole 37.3 12.92
Protein Annotations
EnsemblPlants:CDY07340EnsemblPlantsGene:GSBRNA2T00124292001Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likePANTHER:PTHR26379PANTHER:PTHR26379:SF213
PFAM:PF00917PFscan:PS50144ProteinID:CDY07340ProteinID:CDY07340.1SMART:SM00061SUPFAM:SSF49599
UniParc:UPI0004EEC416UniProt:A0A078EZ10MapMan:35.2:::
Description
BnaA07g24190DBnaA07g24190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EZ10]
Coordinates
chrLK031978:+:8650..10351
Molecular Weight (calculated)
36777.4 Da
IEP (calculated)
5.142
GRAVY (calculated)
-0.418
Length
319 amino acids
Sequence
(BLAST)
001: MGSNSSTAAS TEVSTIVKHW REHPPSSYSL KIHNFSELEK STALSDHKYQ SRLFTYGGYN WRLIIYPKGN GEDNVRGFFS MYVEIDSKSL MLFTSPTEIF
101: AELRFFVYNK KENKYFTIQD VGVKPFSELK TRWGLQQGGQ CEFGVDVIVA PSLTNWEVLS FTKKYFDPKF SWTIKDFSEL KEDVQKSNSF PMGGKEWVLA
201: LYPKGALEAH GKWLSIFLCL ADSDKPEADE KIFVQARLGV LNPLGSYHFE YPLETWYTEQ SPGWGWAQFL PLAELPKVYL DKEDALKVEI EFKVVSETKY
301: SFTEADPLEK DWVQLTPEN
Best Arabidopsis Sequence Match ( AT1G69650.1 )
(BLAST)
001: MGASCSAPVS STIKKNWRDH PPSSYSLKIH NFSQLEKTTS FSGHKYQSRL FSSGDITGNV KDNGSGFISM YVELDSSSLM ESKPPTEVFA ELRFFVYNKK
101: QNKYFTKDVE IKRFDALKMV WGLPKGNECE FGVDVIVAPP LTNWEILSFH DEKLSYPKVT WSVKNFSQWK ENECSKPNRF SIGGREWVLK LFPKGNSRAK
201: GKYLSVFLYL ADNETLKPDE KIFTQVVVRI LNPLGSNHVA SRLNYWHKGS NFGYGWCKFL SLDKIRKTYL DKEDTLMIEA EFEVVSATKF STII
Arabidopsis Description
TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9FWZ3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.