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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • nucleus 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000640.1-P Field mustard cytosol 100.0 100.0
CDY34004 Canola cytosol 80.94 86.33
AT3G20370.1 Thale cress extracellular, plasma membrane 65.0 54.88
CDX82246 Canola endoplasmic reticulum, extracellular 64.38 54.64
CDY43080 Canola endoplasmic reticulum, vacuole 62.81 52.76
CDY50083 Canola endoplasmic reticulum, vacuole 62.5 52.49
CDY43081 Canola extracellular, vacuole 61.88 51.83
CDY50084 Canola extracellular, vacuole 60.62 50.79
CDX82252 Canola plastid 54.38 48.47
CDY29822 Canola vacuole 60.94 48.39
CDY25415 Canola vacuole 59.69 47.28
CDY36041 Canola plasma membrane 52.5 47.19
CDY39666 Canola endoplasmic reticulum, vacuole 48.12 46.67
CDX82248 Canola endoplasmic reticulum, vacuole 64.06 46.59
CDX82249 Canola plasma membrane, vacuole 55.0 45.95
CDX82251 Canola extracellular, golgi 56.25 45.11
CDY50282 Canola endoplasmic reticulum, vacuole 51.88 43.12
CDY04288 Canola cytosol 18.75 42.86
CDY70350 Canola plastid 22.81 42.69
CDY70349 Canola cytosol 35.0 42.42
AT3G20380.1 Thale cress extracellular, vacuole 49.69 42.4
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 65.94 41.05
CDY44083 Canola cytosol 39.38 40.0
CDY36040 Canola extracellular 47.19 39.95
CDY07338 Canola plastid 36.88 39.07
CDY57407 Canola cytosol 37.81 39.03
CDY58708 Canola cytosol, nucleus, plastid 36.25 37.66
CDY04290 Canola extracellular 29.69 36.97
CDY28575 Canola golgi 33.75 35.41
CDY39500 Canola cytosol 35.31 35.31
CDX95908 Canola plastid 40.0 34.97
CDY28571 Canola cytosol 24.69 34.96
CDX99123 Canola cytosol 20.94 34.9
CDY07340 Canola plastid 34.38 34.48
CDY04283 Canola plastid 33.75 33.86
CDX81648 Canola plastid 28.12 31.47
CDX74582 Canola extracellular, golgi, plastid 36.56 31.28
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 35.31 30.46
CDY19307 Canola cytosol 36.25 29.9
CDY44084 Canola cytosol 38.44 29.15
CDX82371 Canola cytosol 27.5 28.48
KRH68153 Soybean cytosol 27.5 28.21
CDX75913 Canola cytosol 27.19 28.16
CDX86065 Canola cytosol 26.88 27.3
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 29.69 27.14
CDX80557 Canola extracellular 29.38 26.86
CDY05531 Canola cytosol 25.0 26.76
CDX87056 Canola extracellular 28.44 26.53
CDY19777 Canola extracellular 28.44 26.45
CDY46265 Canola plasma membrane 38.75 26.38
CDX88229 Canola extracellular 28.75 26.29
CDY29329 Canola plasma membrane 38.44 26.11
CDY67361 Canola vacuole 28.44 26.0
CDY05324 Canola cytosol 24.38 26.0
CDX87055 Canola golgi, plasma membrane 26.88 25.83
CDX87054 Canola extracellular 27.81 25.43
CDY19775 Canola extracellular 27.81 25.43
CDY05532 Canola extracellular 27.5 25.07
CDY24977 Canola extracellular 27.5 25.07
CDY19776 Canola extracellular, plasma membrane, vacuole 26.88 24.86
CDX91854 Canola cytosol 22.5 24.24
CDY70520 Canola vacuole 25.0 24.1
CDX74378 Canola cytosol 20.94 23.34
CDX84705 Canola cytosol 21.25 22.22
CDX79503 Canola cytosol 20.62 21.64
CDX81956 Canola extracellular 20.62 21.5
CDY37377 Canola cytosol, plastid 32.81 21.43
CDX91855 Canola extracellular, plasma membrane, vacuole 13.12 21.21
CDY07146 Canola cytosol 18.44 20.0
CDY51713 Canola cytosol 18.12 19.66
CDY12160 Canola cytosol 19.06 19.61
CDY36039 Canola vacuole 55.62 19.33
CDY07196 Canola cytosol 17.19 18.52
CDY23783 Canola cytosol 17.81 18.51
CDY60616 Canola cytosol, mitochondrion, plastid 16.56 18.4
CDY48522 Canola cytosol 15.31 17.56
Protein Annotations
Gene3D:2.60.210.10MapMan:35.2EnsemblPlants:CDX83143ProteinID:CDX83143ProteinID:CDX83143.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00138667001InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_dom
PFAM:PF00917PFscan:PS50144PANTHER:PTHR26379PANTHER:PTHR26379:SF213SMART:SM00061SUPFAM:SSF49599
InterPro:TRAF-likeUniParc:UPI000254020FSEG:seg:::
Description
BnaA03g23630D
Coordinates
chrLK031832:+:36490..37989
Molecular Weight (calculated)
36730.0 Da
IEP (calculated)
8.518
GRAVY (calculated)
-0.426
Length
320 amino acids
Sequence
(BLAST)
001: MHYLQKHQEI SSRDYKLSSS NTLKGLRERP PSTYSLKMEA FHRVLNSTEY YETRPFSAGG YNWTLRVYPN GNNKDGGSGY LSLYVAIDKS SLDASAHQEV
101: YADLRFYIFN RNQRKYFTIQ DTDVFRFNAF NTMWGFSQVL PLDTFKDLKN GYLYDGDHSE FGVDVTVPKP FEKSELLSFS KRSDRFTWTI RGFSTLTRYT
201: YSDVISFAGR KWQLGINSSG SGSGSGKAVS LFFHLLANQR TGAYEAVYVL AKFQVLNQLK LGNIQMELEN WYGITSFGWG FSEFVSFDDL RDSSKGFLVD
301: DTLMVQVELE AISTTKYFPS
Best Arabidopsis Sequence Match ( AT3G20360.1 )
(BLAST)
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.