Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039646.1-P | Field mustard | plastid | 91.91 | 97.52 |
| CDY29329 | Canola | plasma membrane | 97.45 | 97.24 |
| CDX74582 | Canola | extracellular, golgi, plastid | 60.43 | 75.94 |
| CDX99123 | Canola | cytosol | 18.3 | 44.79 |
| CDX83143 | Canola | cytosol | 26.38 | 38.75 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 30.0 | 38.01 |
| CDY70349 | Canola | cytosol | 21.06 | 37.5 |
| CDY04288 | Canola | cytosol | 11.06 | 37.14 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 28.94 | 36.07 |
| CDX82252 | Canola | plastid | 27.45 | 35.93 |
| CDY44083 | Canola | cytosol | 23.83 | 35.56 |
| CDY70350 | Canola | plastid | 12.77 | 35.09 |
| CDY04290 | Canola | extracellular | 19.15 | 35.02 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 27.87 | 34.38 |
| CDY34004 | Canola | cytosol | 21.91 | 34.33 |
| CDY36041 | Canola | plasma membrane | 25.96 | 34.27 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 27.66 | 34.12 |
| CDY28575 | Canola | golgi | 22.13 | 34.1 |
| CDY28571 | Canola | cytosol | 16.38 | 34.07 |
| CDY43081 | Canola | extracellular, vacuole | 27.45 | 33.77 |
| CDX86065 | Canola | cytosol | 22.55 | 33.65 |
| CDY07338 | Canola | plastid | 21.49 | 33.44 |
| CDX82249 | Canola | plasma membrane, vacuole | 27.23 | 33.42 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 21.7 | 33.12 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 27.02 | 32.99 |
| CDY04283 | Canola | plastid | 22.34 | 32.92 |
| CDY07340 | Canola | plastid | 22.34 | 32.92 |
| CDY50084 | Canola | extracellular, vacuole | 26.6 | 32.72 |
| CDX82251 | Canola | extracellular, golgi | 27.66 | 32.58 |
| CDY57407 | Canola | cytosol | 21.49 | 32.58 |
| CDY29822 | Canola | vacuole | 27.66 | 32.26 |
| CDX95908 | Canola | plastid | 24.89 | 31.97 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 29.79 | 31.82 |
| CDY25415 | Canola | vacuole | 27.23 | 31.68 |
| CDY39500 | Canola | cytosol | 21.49 | 31.56 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 21.91 | 31.21 |
| KRH68153 | Soybean | cytosol | 20.21 | 30.45 |
| CDY36040 | Canola | extracellular | 23.83 | 29.63 |
| CDX82371 | Canola | cytosol | 19.15 | 29.13 |
| CDX75913 | Canola | cytosol | 18.94 | 28.8 |
| CDX81648 | Canola | plastid | 17.45 | 28.67 |
| CDX87055 | Canola | golgi, plasma membrane | 19.36 | 27.33 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 19.36 | 26.3 |
| CDY19307 | Canola | cytosol | 21.28 | 25.77 |
| CDY44084 | Canola | cytosol | 22.98 | 25.59 |
| CDX79503 | Canola | cytosol | 16.38 | 25.25 |
| CDX84705 | Canola | cytosol | 16.38 | 25.16 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 10.43 | 24.75 |
| CDX88229 | Canola | extracellular | 18.3 | 24.57 |
| CDY67361 | Canola | vacuole | 18.3 | 24.57 |
| CDY12160 | Canola | cytosol | 16.17 | 24.44 |
| CDY05531 | Canola | cytosol | 15.53 | 24.41 |
| CDY07146 | Canola | cytosol | 15.32 | 24.41 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.6 | 24.32 |
| CDY19775 | Canola | extracellular | 18.09 | 24.29 |
| CDX87054 | Canola | extracellular | 18.09 | 24.29 |
| CDX87056 | Canola | extracellular | 17.66 | 24.2 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.87 | 24.0 |
| CDX91854 | Canola | cytosol | 15.11 | 23.91 |
| CDY19777 | Canola | extracellular | 17.45 | 23.84 |
| CDX80557 | Canola | extracellular | 17.66 | 23.71 |
| CDY23783 | Canola | cytosol | 15.53 | 23.7 |
| CDX74378 | Canola | cytosol | 14.47 | 23.69 |
| CDY51713 | Canola | cytosol | 14.68 | 23.39 |
| CDY05324 | Canola | cytosol | 14.89 | 23.33 |
| CDY70520 | Canola | vacuole | 16.38 | 23.19 |
| CDY05532 | Canola | extracellular | 17.23 | 23.08 |
| CDY24977 | Canola | extracellular | 17.23 | 23.08 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 13.83 | 22.57 |
| CDY07196 | Canola | cytosol | 14.26 | 22.56 |
| CDX81956 | Canola | extracellular | 14.47 | 22.15 |
| CDY37377 | Canola | cytosol, plastid | 22.13 | 21.22 |
| CDY48522 | Canola | cytosol | 12.34 | 20.79 |
| CDY36039 | Canola | vacuole | 30.85 | 15.74 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | GO:A0A078I5X7 | UniProt:A0A078I5X7 | EnsemblPlants:CDY46265 | ProteinID:CDY46265 |
| ProteinID:CDY46265.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00083618001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | PFAM:PF00917 |
| PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 | SMART:SM00061 | SUPFAM:SSF49599 | TMHMM:TMhelix |
| InterPro:TRAF-like | UniParc:UPI0004EF0696 | : | : | : | : |
Description
BnaC05g50540DBnaC05g50540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5X7]
Coordinates
chrLK032657:-:26295..29349
Molecular Weight (calculated)
53431.8 Da
IEP (calculated)
5.911
GRAVY (calculated)
-0.385
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLNEKRNLN LNGAIFLFSS FFCAGFATIQ VSLVPTKGTN NAVPCNPQSS RLAAINGAEP RLSAEQKFMR TRPPSAYCVR IESCSELMTR SPNLQYETRP
101: FSVGGFNWTF ILQPFGNTTS VGDWISAYVA IDPSGLVGEN REVYADLRFL VYSKSKDQYW TSMDTEIRHF HQFRTTWGSP NLIQTKQFKA KDKEYIFDDD
201: QCVFGVDISV YPYFNQWEIL SIDKTVYGPN SWKLMKFSTL TRDFYISDDF SVGGKNWALK VYPNGNGTGE GNSLSLYVIL SENQILKTYE KVYVRAKLRV
301: LDQKQSKHLQ KPILSWFDTP GEGFGFEQFV SFTDLQNPAK GFIVDDSLTV QVQFEATSST NYYSANAAQL MSNFFSIGLS DTTDACTFTF GDSQVQENLN
401: FEDINDDVYA QQLSAECVVK RRVEKLVSRK RSRTEASSSS VEINTDQSNS MVMMSKILTF TTEREQKQQK
101: FSVGGFNWTF ILQPFGNTTS VGDWISAYVA IDPSGLVGEN REVYADLRFL VYSKSKDQYW TSMDTEIRHF HQFRTTWGSP NLIQTKQFKA KDKEYIFDDD
201: QCVFGVDISV YPYFNQWEIL SIDKTVYGPN SWKLMKFSTL TRDFYISDDF SVGGKNWALK VYPNGNGTGE GNSLSLYVIL SENQILKTYE KVYVRAKLRV
301: LDQKQSKHLQ KPILSWFDTP GEGFGFEQFV SFTDLQNPAK GFIVDDSLTV QVQFEATSST NYYSANAAQL MSNFFSIGLS DTTDACTFTF GDSQVQENLN
401: FEDINDDVYA QQLSAECVVK RRVEKLVSRK RSRTEASSSS VEINTDQSNS MVMMSKILTF TTEREQKQQK
001: MYSEEKKSRN YGSIFVYCFF CFVLIVEVAR FAKPYINLQN LIETEAVVEE GFMAVGNSGN LPCGSSKPSS ASVRAHDEQK LSQAVTTDTR TRPPNSYCVK
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST
Arabidopsis Description
ZW9At1g58270/F19C14_8 [Source:UniProtKB/TrEMBL;Acc:Q9SLV3]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.