Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020541.1-P | Field mustard | extracellular | 100.0 | 100.0 |
| CDY24977 | Canola | extracellular | 98.86 | 98.86 |
| CDY67361 | Canola | vacuole | 88.03 | 88.29 |
| CDX88229 | Canola | extracellular | 86.61 | 86.86 |
| CDY70520 | Canola | vacuole | 81.77 | 86.45 |
| CDX87054 | Canola | extracellular | 86.04 | 86.29 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 85.75 | 86.0 |
| CDY05531 | Canola | cytosol | 73.22 | 85.95 |
| CDY19775 | Canola | extracellular | 85.19 | 85.43 |
| CDX80557 | Canola | extracellular | 84.33 | 84.57 |
| CDY05324 | Canola | cytosol | 69.23 | 81.0 |
| CDX81956 | Canola | extracellular | 70.66 | 80.78 |
| AT5G26320.1 | Thale cress | vacuole | 71.51 | 71.31 |
| CDX87056 | Canola | extracellular | 67.81 | 69.39 |
| CDY19777 | Canola | extracellular | 67.52 | 68.9 |
| CDX87055 | Canola | golgi, plasma membrane | 63.53 | 66.97 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 64.96 | 65.9 |
| CDY04288 | Canola | cytosol | 13.68 | 34.29 |
| CDY70350 | Canola | plastid | 15.67 | 32.16 |
| CDY70349 | Canola | cytosol | 22.51 | 29.92 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 31.91 | 29.71 |
| KRH68153 | Soybean | cytosol | 26.21 | 29.49 |
| CDY43081 | Canola | extracellular, vacuole | 31.91 | 29.32 |
| CDY50084 | Canola | extracellular, vacuole | 31.91 | 29.32 |
| CDX99123 | Canola | cytosol | 15.95 | 29.17 |
| CDY44083 | Canola | cytosol | 25.93 | 28.89 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 31.05 | 28.61 |
| CDY04290 | Canola | extracellular | 20.8 | 28.4 |
| CDX75913 | Canola | cytosol | 24.79 | 28.16 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 30.48 | 28.08 |
| CDX82252 | Canola | plastid | 28.49 | 27.86 |
| CDX82371 | Canola | cytosol | 24.5 | 27.83 |
| CDY36041 | Canola | plasma membrane | 27.92 | 27.53 |
| CDX83143 | Canola | cytosol | 25.07 | 27.5 |
| CDX82249 | Canola | plasma membrane, vacuole | 29.91 | 27.42 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 23.65 | 26.95 |
| CDY07338 | Canola | plastid | 23.08 | 26.82 |
| CDX82251 | Canola | extracellular, golgi | 29.91 | 26.32 |
| CDY23783 | Canola | cytosol | 23.08 | 26.3 |
| CDY28575 | Canola | golgi | 22.79 | 26.23 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 32.76 | 26.14 |
| CDY04283 | Canola | plastid | 23.65 | 26.02 |
| CDY36040 | Canola | extracellular | 27.92 | 25.93 |
| CDY57407 | Canola | cytosol | 22.79 | 25.81 |
| CDY07146 | Canola | cytosol | 21.65 | 25.76 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 28.21 | 25.71 |
| CDY29822 | Canola | vacuole | 29.34 | 25.56 |
| CDX81648 | Canola | plastid | 20.8 | 25.52 |
| CDY25415 | Canola | vacuole | 29.34 | 25.5 |
| CDY07340 | Canola | plastid | 23.08 | 25.39 |
| CDY39500 | Canola | cytosol | 23.08 | 25.31 |
| CDY28571 | Canola | cytosol | 16.24 | 25.22 |
| CDX95908 | Canola | plastid | 26.21 | 25.14 |
| CDY51713 | Canola | cytosol | 20.8 | 24.75 |
| CDX84705 | Canola | cytosol | 21.37 | 24.51 |
| CDY12160 | Canola | cytosol | 21.65 | 24.44 |
| CDX74378 | Canola | cytosol | 19.94 | 24.39 |
| CDX79503 | Canola | cytosol | 21.08 | 24.26 |
| CDX91854 | Canola | cytosol | 20.51 | 24.24 |
| CDY34004 | Canola | cytosol | 19.66 | 23.0 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 18.8 | 22.92 |
| CDX74582 | Canola | extracellular, golgi, plastid | 23.93 | 22.46 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 20.8 | 22.12 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.25 | 21.72 |
| CDY07196 | Canola | cytosol | 18.23 | 21.55 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 22.51 | 21.29 |
| CDX86065 | Canola | cytosol | 19.09 | 21.27 |
| CDY48522 | Canola | cytosol | 16.24 | 20.43 |
| CDY44084 | Canola | cytosol | 24.5 | 20.38 |
| CDY19307 | Canola | cytosol | 22.51 | 20.36 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.93 | 17.7 |
| CDY46265 | Canola | plasma membrane | 23.08 | 17.23 |
| CDY37377 | Canola | cytosol, plastid | 23.36 | 16.73 |
| CDY29329 | Canola | plasma membrane | 22.22 | 16.56 |
| CDY36039 | Canola | vacuole | 30.2 | 11.51 |
Protein Annotations
| EnsemblPlants:CDY05532 | EnsemblPlantsGene:GSBRNA2T00120473001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF214 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY05532 | ProteinID:CDY05532.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0002546C94 | MapMan:35.2 | : | : |
Description
BnaA02g31590D
Coordinates
chrLK031962:-:706339..708567
Molecular Weight (calculated)
39036.4 Da
IEP (calculated)
7.422
GRAVY (calculated)
-0.097
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSQQRSLCF ISLAFLFITC SSAEFLIQQV TQGRGTENNS SYSLDANLGV TRVLRDERPS SKIVTIAGYS VIKGRGEPYE SSVFEAAGYK WRIVLYVVGN
101: ANDGGAGYIS LYVRIEETES LPFGWELNNV DLKLFVHNPK LNKYLTVTDG ALKRFNGVKK ESGFGQLIAL STFENTNEGY IVQDTCSFGA EILIVKPAEV
201: QEKVTFISNP PDNVFTWKIL RFSNLEDKFY YSADFLVGDR YWRLGFNPKG DGGGRPHALP IFLFAQGFGP NTVATNTWGA VNLRLKNQRS TNHRQIYSAA
301: WYPIRSGYGV GVNNIILLAD LNDASKGYLV NDAIIFEAEM VKVSVTNIVS V
101: ANDGGAGYIS LYVRIEETES LPFGWELNNV DLKLFVHNPK LNKYLTVTDG ALKRFNGVKK ESGFGQLIAL STFENTNEGY IVQDTCSFGA EILIVKPAEV
201: QEKVTFISNP PDNVFTWKIL RFSNLEDKFY YSADFLVGDR YWRLGFNPKG DGGGRPHALP IFLFAQGFGP NTVATNTWGA VNLRLKNQRS TNHRQIYSAA
301: WYPIRSGYGV GVNNIILLAD LNDASKGYLV NDAIIFEAEM VKVSVTNIVS V
001: MNNQKWSIGF ISLAFLFITS SSAEFIIQQV TKGRGIEYNS SYSLEENLGV TRELREERPS SKIVTITSFS VIKGRGEPYE SSVFEAAGYK WRLVLYVNGN
101: KNDGGNDHIS LYARIEETNS LPLGWEVNVD LKLFVHNGKL HKYLTVTDGL VKRYNNAKKE WGFGQLIPRS TFYNANEGYL DQDTGSFGAE IFIVKPAQQQ
201: EKVTFISNPP NNVFTWKILR FSTLEDKFYY SDDFLVEDRY WRLGFNPKGD GGGRPHALPI FLFAQGHKAN AVATNTWGAV NLRLKNQRST NHRQIYSAAW
301: YPIGSGYGVG VNNIILLADL NDASKGYLVN DAIIFEAEMV KVSITNIVSA
101: KNDGGNDHIS LYARIEETNS LPLGWEVNVD LKLFVHNGKL HKYLTVTDGL VKRYNNAKKE WGFGQLIPRS TFYNANEGYL DQDTGSFGAE IFIVKPAQQQ
201: EKVTFISNPP NNVFTWKILR FSTLEDKFYY SDDFLVEDRY WRLGFNPKGD GGGRPHALPI FLFAQGHKAN AVATNTWGAV NLRLKNQRST NHRQIYSAAW
301: YPIGSGYGVG VNNIILLADL NDASKGYLVN DAIIFEAEMV KVSITNIVSA
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT5G26280]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.