Factsheet for Bra040903.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50084	Canola	extracellular, vacuole	98.43	98.43
CDY43081	Canola	extracellular, vacuole	96.34	96.34
AT3G20370.1	Thale cress	extracellular, plasma membrane	68.06	68.6
Bra040904.1-P	Field mustard	extracellular, vacuole	68.59	68.59
Bra035787.1-P	Field mustard	vacuole	71.47	67.57
Bra001786.1-P	Field mustard	extracellular, golgi	63.87	61.15
Bra000640.1-P	Field mustard	cytosol	51.05	60.94
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	53.66	57.42
Bra001785.1-P	Field mustard	nucleus	42.15	57.09
AT3G20380.1	Thale cress	extracellular, vacuole	51.83	52.8
Bra007873.1-P	Field mustard	cytosol	35.6	43.17
Bra003989.1-P	Field mustard	plastid	30.63	40.34
Bra031322.1-P	Field mustard	cytosol, plastid	31.41	38.71
Bra003990.1-P	Field mustard	plastid	29.58	37.67
Bra003837.1-P	Field mustard	cytosol	32.46	36.8
Bra004405.1-P	Field mustard	plastid	34.29	35.79
Bra023852.1-P	Field mustard	cytosol	29.32	35.0
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	34.29	34.29
Bra009894.1-P	Field mustard	cytosol	22.77	34.12
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.89	33.71
Bra003836.1-P	Field mustard	extracellular, golgi	19.63	33.04
Bra001660.1-P	Field mustard	cytosol	24.61	32.75
Bra036573.1-P	Field mustard	extracellular	29.84	32.57
Bra020541.1-P	Field mustard	extracellular	29.58	32.19
Bra034175.1-P	Field mustard	cytosol, plastid	27.75	31.74
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	17.8	31.63
Bra020540.1-P	Field mustard	cytosol	24.61	31.44
KRH68153	Soybean	cytosol	24.61	30.13
Bra036572.1-P	Field mustard	extracellular	26.7	29.65
Bra001787.1-P	Field mustard	endoplasmic reticulum	69.9	28.71
Bra039646.1-P	Field mustard	plastid	32.2	27.77
Bra037411.1-P	Field mustard	mitochondrion	19.63	26.22
Bra007874.1-P	Field mustard	cytosol	26.7	25.5
Bra037358.1-P	Field mustard	cytosol	19.11	25.35
Bra022923.1-P	Field mustard	cytosol	18.59	23.2
Bra005554.1-P	Field mustard	cytosol	18.59	23.05

Protein Annotations

EnsemblPlants:Bra040903.1	EnsemblPlants:Bra040903.1-P	EnsemblPlantsGene:Bra040903	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SEG:seg	SignalP:SignalP-noTM	SMART:SM00061
SUPFAM:SSF49599	TMHMM:TMhelix	UniParc:UPI000253EA56	UniProt:M4FIH4	MapMan:35.2	:

Description

AT3G20370 (E=1e-136) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrScaffold000303:+:5664..7525

Molecular Weight (calculated)

43734.2 Da

IEP (calculated)

8.454

GRAVY (calculated)

-0.437

Length

382 amino acids

Sequence
(BLAST)

001: MSNHYTNTVS TVLLLFFLFI SSASSSSFIR QYTDGFNKNF QQENGAVPDS IRGEAHYLRQ HEQEISSRDY KLSASNTVKG LRDRPPSSYS LKMESFNTLL
101: KSTNADKYVS RPFSAAGYKW TLVVYPNGNK NDNGAGFLSL YVAIDNSTLS PHQEVFVDLR FYVFNRVEKK YLTIQDTDGW RFSYFKTMWG FSQVLPVNTF
201: KDSNNGYLYD GDHCEFGVDV TTPTVFKESE LFTVTDKFYN PKYTWSIQKF STLLEDSYYS DVFSIGGRRW NIKVYPGGCA TGKGKAVSMF LILNANEKFR
301: PYEKIYVGAK LRVLNQRNFN SVEKQIDNWY NGPGYGDGSG WGYYEFIPFS DLKDSSKGFL VNDVLMVQVE IEAISSTKYF PS

Best Arabidopsis Sequence Match ( AT3G20370.1 )
(BLAST)

001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS

Arabidopsis Description

AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.