Factsheet for Bra031322.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57407	Canola	cytosol	98.39	98.39
Bra034175.1-P	Field mustard	cytosol, plastid	76.77	71.26
Bra007873.1-P	Field mustard	cytosol	56.45	55.56
AT3G22085.1	Thale cress	cytosol	48.39	51.55
Bra003989.1-P	Field mustard	plastid	46.45	49.66
Bra023852.1-P	Field mustard	cytosol	49.03	47.5
Bra003990.1-P	Field mustard	plastid	45.81	47.33
Bra004405.1-P	Field mustard	plastid	52.9	44.81
Bra001785.1-P	Field mustard	nucleus	35.48	39.01
Bra000640.1-P	Field mustard	cytosol	39.03	37.81
Bra007874.1-P	Field mustard	cytosol	43.55	33.75
Bra040904.1-P	Field mustard	extracellular, vacuole	39.03	31.68
Bra040903.1-P	Field mustard	extracellular, vacuole	38.71	31.41
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	36.13	31.37
Bra035787.1-P	Field mustard	vacuole	38.71	29.7
KRH68153	Soybean	cytosol	29.68	29.49
Bra001660.1-P	Field mustard	cytosol	26.77	28.92
Bra001786.1-P	Field mustard	extracellular, golgi	36.77	28.57
Bra009894.1-P	Field mustard	cytosol	21.29	25.88
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	31.61	25.65
Bra003837.1-P	Field mustard	cytosol	27.74	25.52
Bra020540.1-P	Field mustard	cytosol	23.23	24.08
Bra036573.1-P	Field mustard	extracellular	26.45	23.43
Bra020541.1-P	Field mustard	extracellular	26.13	23.08
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	25.81	22.86
Bra036572.1-P	Field mustard	extracellular	25.16	22.67
Bra039646.1-P	Field mustard	plastid	31.29	21.9
Bra037411.1-P	Field mustard	mitochondrion	19.68	21.33
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	13.55	19.53
Bra003836.1-P	Field mustard	extracellular, golgi	13.55	18.5
Bra037358.1-P	Field mustard	cytosol	16.77	18.06
Bra022923.1-P	Field mustard	cytosol	17.74	17.97
Bra005554.1-P	Field mustard	cytosol	16.77	16.88
Bra001787.1-P	Field mustard	endoplasmic reticulum	40.65	13.55

Protein Annotations

EnsemblPlants:Bra031322.1	EnsemblPlants:Bra031322.1-P	EnsemblPlantsGene:Bra031322	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SMART:SM00061	SUPFAM:SSF49599	UniParc:UPI0002547705
UniProt:M4ER99	MapMan:35.2	:	:	:	:

Description

AT3G22080 (E=2e-089) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA05:-:16003481..16004765

Molecular Weight (calculated)

35559.2 Da

IEP (calculated)

8.179

GRAVY (calculated)

-0.392

Length

310 amino acids

Sequence
(BLAST)

001: MLKTEKTCVV SDSTITKFGV RPPSTYSMKI QSLSQLKTLF SGTDGYKSRT FSSGKYNWRL VIYPNGNEKD NGTGFISMYV ELDSKSLSSN VLAYLTFFIF
101: NKKENKYFTI QDVEGKQFNA LRLVHGFPQV LPLDTFNDPK NGYVYDGDQC EFGVDVMVPL TNWEVVSFTQ KPTNKKFSWT LNKFSKLKEH CYVSSKFLIE
201: GRNWVLKLYP KGDNSTCSTW LSLFLHLADS ETKTMTTGEE IYTQCDMRIL DPFGSHHVTL KLNQWHKNTS GWGWSEFVSL AKLEEAYLDK QGSLKVEIEF
301: EVVSNITYSP

Best Arabidopsis Sequence Match ( AT3G22080.1 )
(BLAST)

001: MMCSSVSSTT LRSWRERTPN SYSLKLQNIS QVEKSTLFSD GKYQSRLFSS GGYNWRMIIY PKGNRKDDGS GFISMYVEID STSLLTTPTT EVFADLRFFV
101: FNKKENKYYT IQHVESKLFN AFRTIWGLAQ VLPVDTFTDP KNGYIFEGDQ CEFGVDVIVA APPTNWEIHT LHEALSQPKF FWTVKNFSEL NNNVYTSGNF
201: SMRERKWVLK LYPKGDVKGD RKWLSLYLYL DQSETLKESE KIFVQAQLRV LDPRGSNHVT HKISSWYTSS NTAWGYRKFV SLAEIPKAYL DKDTLKVQID
301: VEVVSEAEFS PSMI

Arabidopsis Description

Ubiquitin carboxyl-terminal hydrolase-like protein [Source:UniProtKB/TrEMBL;Acc:F4IYY5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.