Factsheet for Bra007874.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44084	Canola	cytosol	89.75	85.07
Bra007873.1-P	Field mustard	cytosol	46.5	59.05
Bra003989.1-P	Field mustard	plastid	35.75	49.31
Bra003990.1-P	Field mustard	plastid	35.25	47.0
Bra004405.1-P	Field mustard	plastid	42.75	46.72
Bra031322.1-P	Field mustard	cytosol, plastid	33.75	43.55
Bra023852.1-P	Field mustard	cytosol	32.25	40.31
Bra034175.1-P	Field mustard	cytosol, plastid	30.75	36.83
Bra001785.1-P	Field mustard	nucleus	25.25	35.82
Bra000640.1-P	Field mustard	cytosol	25.25	31.56
Bra040904.1-P	Field mustard	extracellular, vacuole	26.25	27.49
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	24.25	27.17
Bra009894.1-P	Field mustard	cytosol	17.25	27.06
Bra040903.1-P	Field mustard	extracellular, vacuole	25.5	26.7
KRH68153	Soybean	cytosol	20.5	26.28
Bra001660.1-P	Field mustard	cytosol	18.25	25.44
Bra001786.1-P	Field mustard	extracellular, golgi	25.0	25.06
Bra035787.1-P	Field mustard	vacuole	25.25	25.0
Bra020540.1-P	Field mustard	cytosol	18.0	24.08
Bra003837.1-P	Field mustard	cytosol	20.25	24.04
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	22.25	23.3
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	20.25	23.14
Bra036573.1-P	Field mustard	extracellular	20.0	22.86
Bra020541.1-P	Field mustard	extracellular	19.75	22.51
Bra036572.1-P	Field mustard	extracellular	17.75	20.64
Bra039646.1-P	Field mustard	plastid	22.25	20.09
Bra037358.1-P	Field mustard	cytosol	14.25	19.79
Bra003836.1-P	Field mustard	extracellular, golgi	11.0	19.38
Bra037411.1-P	Field mustard	mitochondrion	13.75	19.23
Bra005554.1-P	Field mustard	cytosol	13.5	17.53
Bra022923.1-P	Field mustard	cytosol	12.5	16.34
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	8.0	14.88
Bra001787.1-P	Field mustard	endoplasmic reticulum	30.0	12.9

Protein Annotations

EnsemblPlants:Bra007874.1	EnsemblPlants:Bra007874.1-P	EnsemblPlantsGene:Bra007874	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SUPFAM:SSF49599	UniParc:UPI0002546871	UniProt:M4CUH9
MapMan:35.2	:	:	:	:	:

Description

AT2G15710 (E=3e-063) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA02:-:11453649..11462757

Molecular Weight (calculated)

45786.2 Da

IEP (calculated)

5.554

GRAVY (calculated)

-0.450

Length

400 amino acids

Sequence
(BLAST)

001: MLSLDKQRPE SSSSEEVQAV TPWVVSGNVD HEKVIEKFGC DRIDESLIAV AGDKNCQWKL IVYPQGNKKD NGEGFISMYV EIDSESLTST PQCDVFAELI
101: FFVYNKKENK YFTIQDVEVK RFNALKKIWG LQQVLPSDAF NKLENGYIFE GDQCEFGVEV ISPLGDALTK WEILSFNEKL EDPKFSWTVE KYSQLKEDKY
201: ISNTFSMGAW KWVLWLYLKG DSRADGKWLS LYLLLADSDK PKAVSHWYNY MNLGWGWNKL LSLAELRKSY LDKEDALNVE IEFEVACGDS HYQQLLSDSG
301: RTMLHFRWRK VVVQSQLLVS AGKGRPMHER AELLSRPGGG LWNSARIVPS SFGSPLVDYY SKYHRTPNRK KLSTEEYEQL TQETARKAMA GLAACPGFGD

Best Arabidopsis Sequence Match ( AT1G69650.1 )
(BLAST)

001: MGASCSAPVS STIKKNWRDH PPSSYSLKIH NFSQLEKTTS FSGHKYQSRL FSSGDITGNV KDNGSGFISM YVELDSSSLM ESKPPTEVFA ELRFFVYNKK
101: QNKYFTKDVE IKRFDALKMV WGLPKGNECE FGVDVIVAPP LTNWEILSFH DEKLSYPKVT WSVKNFSQWK ENECSKPNRF SIGGREWVLK LFPKGNSRAK
201: GKYLSVFLYL ADNETLKPDE KIFTQVVVRI LNPLGSNHVA SRLNYWHKGS NFGYGWCKFL SLDKIRKTYL DKEDTLMIEA EFEVVSATKF STII

Arabidopsis Description

TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9FWZ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.