Factsheet for Bra009894.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88229	Canola	extracellular	99.22	72.29
Bra020540.1-P	Field mustard	cytosol	80.0	68.23
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	91.76	66.86
Bra036573.1-P	Field mustard	extracellular	89.41	65.14
Bra020541.1-P	Field mustard	extracellular	87.84	63.82
Bra036572.1-P	Field mustard	extracellular	70.98	52.62
AT5G26320.1	Thale cress	vacuole	72.16	52.27
Bra001785.1-P	Field mustard	nucleus	30.98	28.01
Bra001660.1-P	Field mustard	cytosol	29.02	25.78
Bra007873.1-P	Field mustard	cytosol	30.98	25.08
Bra000640.1-P	Field mustard	cytosol	30.98	24.69
KRH68153	Soybean	cytosol	30.2	24.68
Bra040904.1-P	Field mustard	extracellular, vacuole	34.51	23.04
Bra023852.1-P	Field mustard	cytosol	28.63	22.81
Bra040903.1-P	Field mustard	extracellular, vacuole	34.12	22.77
Bra003989.1-P	Field mustard	plastid	25.88	22.76
Bra005554.1-P	Field mustard	cytosol	27.06	22.4
Bra037411.1-P	Field mustard	mitochondrion	25.1	22.38
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	30.59	21.85
Bra004405.1-P	Field mustard	plastid	30.59	21.31
Bra031322.1-P	Field mustard	cytosol, plastid	25.88	21.29
Bra003837.1-P	Field mustard	cytosol	27.84	21.07
Bra001786.1-P	Field mustard	extracellular, golgi	32.94	21.05
Bra022923.1-P	Field mustard	cytosol	23.92	19.93
Bra035787.1-P	Field mustard	vacuole	31.37	19.8
Bra003990.1-P	Field mustard	plastid	22.35	19.0
Bra034175.1-P	Field mustard	cytosol, plastid	24.31	18.56
Bra037358.1-P	Field mustard	cytosol	20.39	18.06
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	26.67	17.8
Bra007874.1-P	Field mustard	cytosol	27.06	17.25
Bra039646.1-P	Field mustard	plastid	25.49	14.67
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	10.59	12.56
Bra003836.1-P	Field mustard	extracellular, golgi	10.98	12.33
Bra001787.1-P	Field mustard	endoplasmic reticulum	34.9	9.57

Protein Annotations

EnsemblPlants:Bra009894.1	EnsemblPlants:Bra009894.1-P	EnsemblPlantsGene:Bra009894	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SMART:SM00061	SUPFAM:SSF49599	UniParc:UPI000253F3C9
UniProt:M4D096	MapMan:35.2	:	:	:	:

Description

AT5G26280 (E=2e-124) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA06:+:17941013..17942228

Molecular Weight (calculated)

28755.3 Da

IEP (calculated)

9.726

GRAVY (calculated)

-0.275

Length

255 amino acids

Sequence
(BLAST)

001: MVTGNKNDGG NGYISLYVRM EETESLRYGW EVNVDLKLFV HNPKQHKYLT VTDGAVKRFN AAKKEWGFGQ LISLATFENT NQGYIVQDTC SFGAEILIVK
101: PANQQEKVTF ISNPPNNVFT WKILRFSNLE DKFYYSADFL VGDRYWRLGF NPKGSGGGRP HALPIFLYAQ GFRSNAVATN TWGAVNLRLK NQRSSNHRQL
201: YSAAWYPIRS GYGVGVNNII LMADLKDTSK GYLVNDAIIF EAEMVKVSVT NIVPV

Best Arabidopsis Sequence Match ( AT5G26260.1 )
(BLAST)

001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V

Arabidopsis Description

F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.