Factsheet for Bra032150.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000640.1-P	Field mustard	cytosol	57.98	64.69
CDX89595	Canola	endoplasmic reticulum, plasma membrane, vacuole	92.16	64.01
Bra040904.1-P	Field mustard	extracellular, vacuole	59.94	56.02
AT3G20370.1	Thale cress	extracellular, plasma membrane	59.1	55.67
Bra040903.1-P	Field mustard	extracellular, vacuole	57.42	53.66
Bra001785.1-P	Field mustard	nucleus	38.38	48.58
Bra001786.1-P	Field mustard	extracellular, golgi	53.5	47.87
AT3G20380.1	Thale cress	extracellular, vacuole	50.14	47.73
Bra035787.1-P	Field mustard	vacuole	53.22	47.03
Bra007873.1-P	Field mustard	cytosol	32.21	36.51
Bra031322.1-P	Field mustard	cytosol, plastid	31.37	36.13
Bra003989.1-P	Field mustard	plastid	28.57	35.17
Bra023852.1-P	Field mustard	cytosol	29.69	33.12
Bra003837.1-P	Field mustard	cytosol	30.81	32.64
Bra003990.1-P	Field mustard	plastid	27.17	32.33
Bra003836.1-P	Field mustard	extracellular, golgi	20.45	32.16
Bra004405.1-P	Field mustard	plastid	32.77	31.97
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	33.33	31.15
Bra009894.1-P	Field mustard	cytosol	21.85	30.59
Bra034175.1-P	Field mustard	cytosol, plastid	28.57	30.54
KRH68153	Soybean	cytosol	25.49	29.17
Bra001660.1-P	Field mustard	cytosol	23.25	28.92
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	17.37	28.84
Bra036573.1-P	Field mustard	extracellular	26.89	27.43
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.61	27.14
Bra020541.1-P	Field mustard	extracellular	26.05	26.5
Bra020540.1-P	Field mustard	cytosol	22.13	26.42
Bra036572.1-P	Field mustard	extracellular	24.93	25.87
Bra039646.1-P	Field mustard	plastid	31.93	25.73
Bra007874.1-P	Field mustard	cytosol	27.17	24.25
Bra001787.1-P	Field mustard	endoplasmic reticulum	61.34	23.55
Bra037411.1-P	Field mustard	mitochondrion	17.93	22.38
Bra022923.1-P	Field mustard	cytosol	18.77	21.9
Bra037358.1-P	Field mustard	cytosol	16.25	20.14
Bra005554.1-P	Field mustard	cytosol	16.53	19.16

Protein Annotations

EnsemblPlants:Bra032150.1	EnsemblPlants:Bra032150.1-P	EnsemblPlantsGene:Bra032150	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SEG:seg	SignalP:SignalP-TM	SMART:SM00061
SUPFAM:SSF49599	TMHMM:TMhelix	UniParc:UPI00025447BA	UniProt:M4ETL8	MapMan:35.2	:

Description

AT3G20370 (E=2e-107) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA04:-:10539819..10541324

Molecular Weight (calculated)

41392.8 Da

IEP (calculated)

8.919

GRAVY (calculated)

-0.395

Length

357 amino acids

Sequence
(BLAST)

001: MKYHYRNTIS ISVAYLFLCL FITYVSSQSL IRQITDDVNT NLKEDVPYVQ KHQEISSRHY NVSNSKTVTG MRNRRPSTYS YKIETNVVDK FETRPFTVGG
101: YNWILHVYLN GNTKDGGAGY VSLYVEIDKS GFVDSAHQEV YADLRFYIFN RNERKYFTIQ DTDVWRFDAF NTMWGFSKVL PVDTFKDPKN GYLYNGEHCE
201: FGVDVIVPTP FEESETFSIS SSSDKYTWTI QKFSTLSKDL YSPVISLGGK KWNILVVPAG SGSGRGKYVS MFLQLSTNQR RGYEYIYVRV KFRVINQSKL
301: SNRESELRNW YGRTYSWGIV DLISFDDLRD SSKGFLVNDA LIVEVQLEAI STTKYFP

Best Arabidopsis Sequence Match ( AT3G20360.1 )
(BLAST)

001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK

Arabidopsis Description

AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.