Factsheet for Bra035787.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25415	Canola	vacuole	100.0	100.0
Bra040903.1-P	Field mustard	extracellular, vacuole	67.57	71.47
Bra040904.1-P	Field mustard	extracellular, vacuole	62.62	66.23
AT3G20370.1	Thale cress	extracellular, plasma membrane	61.88	65.96
Bra001786.1-P	Field mustard	extracellular, golgi	60.15	60.9
Bra000640.1-P	Field mustard	cytosol	47.28	59.69
Bra001785.1-P	Field mustard	nucleus	40.35	57.8
AT3G20380.1	Thale cress	extracellular, vacuole	49.75	53.6
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	47.03	53.22
Bra007873.1-P	Field mustard	cytosol	32.67	41.9
Bra031322.1-P	Field mustard	cytosol, plastid	29.7	38.71
Bra003989.1-P	Field mustard	plastid	27.23	37.93
Bra003837.1-P	Field mustard	cytosol	30.2	36.2
Bra004405.1-P	Field mustard	plastid	32.67	36.07
Bra023852.1-P	Field mustard	cytosol	28.22	35.62
Bra003990.1-P	Field mustard	plastid	26.24	35.33
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	30.94	32.72
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	17.08	32.09
Bra034175.1-P	Field mustard	cytosol, plastid	26.24	31.74
Bra009894.1-P	Field mustard	cytosol	19.8	31.37
Bra003836.1-P	Field mustard	extracellular, golgi	17.57	31.28
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.98	31.14
Bra001660.1-P	Field mustard	cytosol	22.03	31.01
Bra036573.1-P	Field mustard	extracellular	26.49	30.57
Bra020541.1-P	Field mustard	extracellular	25.5	29.34
KRH68153	Soybean	cytosol	22.28	28.85
Bra036572.1-P	Field mustard	extracellular	24.5	28.78
Bra020540.1-P	Field mustard	cytosol	21.29	28.76
Bra039646.1-P	Field mustard	plastid	30.45	27.77
Bra001787.1-P	Field mustard	endoplasmic reticulum	63.86	27.74
Bra037411.1-P	Field mustard	mitochondrion	18.07	25.52
Bra007874.1-P	Field mustard	cytosol	25.0	25.25
Bra037358.1-P	Field mustard	cytosol	16.34	22.92
Bra005554.1-P	Field mustard	cytosol	17.08	22.4
Bra022923.1-P	Field mustard	cytosol	16.83	22.22

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.2	EnsemblPlantsGene:Bra035787	EnsemblPlants:Bra035787.1	EnsemblPlants:Bra035787.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	UniProt:M4F3Y7	InterPro:MATH/TRAF_dom
PFAM:PF00917	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF213	SMART:SM00061	SUPFAM:SSF49599
SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:TRAF-like	UniParc:UPI0002547B04	SEG:seg	:

Description

AT3G20370 (E=6e-131) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA05:-:17213455..17215148

Molecular Weight (calculated)

46379.3 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.523

Length

404 amino acids

Sequence
(BLAST)

001: MKSRYTKTGS AVILLFCLFI ITSASSSSFI QQVTDDFTTN LQLDDGDGPD PIQGEAHYFH THVQDGDGPD PIQGEAHYLH NHDQEVSSRD YKVSASNAIV
101: KGLRSRPPSS YSLKMESFNT LLKSKYSERY VSRPFSAAGY NWTLVVYPNG NKNDKGSGYL SLYAAIDNST LAPHEEVYVD LRFYVFNKKE KKYFTIQDTD
201: VWRYNNFKTM WGFSQVLPGY TFKSPYNGYL YDGDHCEFGV DVTTPTVFQT SELFTVANNF KTPTFTWRLL KFSTLLEDTY LSDTFSIGGR RWNIQVNPSG
301: RDKGKGKALS MYLIVNHNEE LRPFERIYVR AKLRVLNKFK FRNVERQIDN WFSRWETGRA YGWGSSEFVP LSNLKDSSKG FLVDDKLTVQ VEIEAVSTTK
401: YFPS

Best Arabidopsis Sequence Match ( AT3G20370.1 )
(BLAST)

001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS

Arabidopsis Description

AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.