Factsheet for Bra015981.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
plastid 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003837.1-P	Field mustard	cytosol	60.99	69.14
Bra003836.1-P	Field mustard	extracellular, golgi	40.58	68.28
AT1G58270.1	Thale cress	golgi, plasma membrane, vacuole	69.9	67.42
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	35.6	63.26
Bra007873.1-P	Field mustard	cytosol	30.63	37.14
Bra000640.1-P	Field mustard	cytosol	29.84	35.62
Bra003989.1-P	Field mustard	plastid	26.18	34.48
Bra040903.1-P	Field mustard	extracellular, vacuole	34.29	34.29
Bra001785.1-P	Field mustard	nucleus	25.13	34.04
Bra003990.1-P	Field mustard	plastid	26.7	34.0
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	31.15	33.33
Bra040904.1-P	Field mustard	extracellular, vacuole	33.25	33.25
KRH68153	Soybean	cytosol	26.44	32.37
Bra004405.1-P	Field mustard	plastid	30.37	31.69
Bra031322.1-P	Field mustard	cytosol, plastid	25.65	31.61
Bra035787.1-P	Field mustard	vacuole	32.72	30.94
Bra039646.1-P	Field mustard	plastid	35.08	30.25
Bra023852.1-P	Field mustard	cytosol	25.13	30.0
Bra001786.1-P	Field mustard	extracellular, golgi	30.89	29.57
Bra001660.1-P	Field mustard	cytosol	20.68	27.53
Bra034175.1-P	Field mustard	cytosol, plastid	23.56	26.95
Bra009894.1-P	Field mustard	cytosol	17.8	26.67
Bra020540.1-P	Field mustard	cytosol	20.68	26.42
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	23.3	25.43
Bra005554.1-P	Field mustard	cytosol	20.16	25.0
Bra036573.1-P	Field mustard	extracellular	22.25	24.29
Bra037411.1-P	Field mustard	mitochondrion	18.06	24.13
Bra037358.1-P	Field mustard	cytosol	18.06	23.96
Bra020541.1-P	Field mustard	extracellular	21.99	23.93
Bra022923.1-P	Field mustard	cytosol	18.85	23.53
Bra036572.1-P	Field mustard	extracellular	20.94	23.26
Bra007874.1-P	Field mustard	cytosol	23.3	22.25
Bra001787.1-P	Field mustard	endoplasmic reticulum	34.82	14.3

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.2	EnsemblPlantsGene:Bra015981	EnsemblPlants:Bra015981.1	EnsemblPlants:Bra015981.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002083
InterPro:IPR008974	UniProt:M4DHK4	InterPro:MATH/TRAF_dom	PFAM:PF00917	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	SMART:SM00061	SUPFAM:SSF49599	TMHMM:TMhelix	InterPro:TRAF-like	UniParc:UPI0002541D3E
SEG:seg	:	:	:	:	:

Description

AT1G58270 (E=3e-149) ZW9 | ZW9

Coordinates

chrA07:-:19957431..19959213

Molecular Weight (calculated)

43449.3 Da

IEP (calculated)

6.872

GRAVY (calculated)

-0.359

Length

382 amino acids

Sequence
(BLAST)

001: MYTEEKKKDK NYGSIFAYCV LCFVLIVEVA RFAKPYYGNL QNLMETEALV VEEGFVDVMN SGKLPCPFKT SRSASARSHE KLSGLIRRED RARPPSSYCV
101: KFQNFATMAK LVKDNGDKYE SRPFSVGGYN WTLLIYPNEN KPVGSGGYVS MYVRIDNSSL IANPHDVYAE ITFLTYKSTI DRYHFLQETD AQRFHLFKQQ
201: YGQLNFLEIG YYKDPGHGFI FDGGQSVFGV DILVANPFEK WEVFSYEENI RDPLFNWKLT KFSTCNLDSY TSGSFSSGGR DWVLKVYPNG VGHATGNSLS
301: LFLLSASNEK GYVKAKLRVI DQIRSNHLEK QVDGWPNATE NGWGFEKFIS FADLKDSTKG FLADDAIKFE VEILSFSKTD TL

Best Arabidopsis Sequence Match ( AT1G58270.1 )
(BLAST)

001: MYSEEKKSRN YGSIFVYCFF CFVLIVEVAR FAKPYINLQN LIETEAVVEE GFMAVGNSGN LPCGSSKPSS ASVRAHDEQK LSQAVTTDTR TRPPNSYCVK
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST

Arabidopsis Description

ZW9At1g58270/F19C14_8 [Source:UniProtKB/TrEMBL;Acc:Q9SLV3]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.