Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015981.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 67.42 | 69.9 |
| Bra003839.1-P | Field mustard | cytosol, extracellular, plasma membrane | 34.6 | 63.72 |
| Bra003837.1-P | Field mustard | cytosol | 53.54 | 62.91 |
| Bra003836.1-P | Field mustard | extracellular, golgi | 35.35 | 61.67 |
| AT3G46190.2 | Thale cress | cytosol | 35.35 | 45.02 |
| AT3G28220.1 | Thale cress | cytosol | 40.15 | 42.97 |
| AT3G22085.1 | Thale cress | cytosol | 26.26 | 35.74 |
| AT1G69660.1 | Thale cress | cytosol | 20.71 | 35.5 |
| AT3G22080.1 | Thale cress | mitochondrion | 28.03 | 35.35 |
| AT3G20360.1 | Thale cress | endoplasmic reticulum, extracellular | 32.32 | 35.26 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 32.83 | 34.3 |
| AT1G65050.1 | Thale cress | cytosol, mitochondrion | 13.89 | 33.95 |
| KRH68153 | Soybean | cytosol | 25.25 | 32.05 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 30.05 | 31.73 |
| AT1G69650.1 | Thale cress | plastid | 22.73 | 30.61 |
| AT1G65150.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 21.72 | 29.05 |
| AT2G15710.1 | Thale cress | cytosol | 26.52 | 28.77 |
| AT4G09770.4 | Thale cress | cytosol | 23.23 | 28.48 |
| AT3G17380.1 | Thale cress | cytosol | 22.22 | 28.48 |
| AT1G65370.1 | Thale cress | cytosol | 16.16 | 28.19 |
| AT4G00780.1 | Thale cress | cytosol | 18.43 | 24.41 |
| AT4G01390.1 | Thale cress | cytosol | 18.18 | 24.0 |
| AT2G32880.1 | Thale cress | cytosol | 18.94 | 23.58 |
| AT5G26290.1 | Thale cress | extracellular | 19.95 | 23.51 |
| AT5G26260.1 | Thale cress | extracellular | 20.71 | 23.36 |
| AT5G26300.1 | Thale cress | extracellular | 20.2 | 22.92 |
| AT5G26280.3 | Thale cress | plastid | 20.96 | 22.49 |
| AT5G26320.1 | Thale cress | vacuole | 19.44 | 21.88 |
| AT4G09780.1 | Thale cress | endoplasmic reticulum, golgi | 22.22 | 20.61 |
| AT2G04170.1 | Thale cress | mitochondrion | 19.19 | 18.1 |
| AT2G04190.1 | Thale cress | cytosol | 18.69 | 18.0 |
| AT2G32870.1 | Thale cress | cytosol | 17.93 | 17.07 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | EntrezGene:842196 | ProteinID:AAF82260.1 | EMBL:AB028194 | ProteinID:AEE33527.1 |
| EMBL:AF332419 | EMBL:AF419580 | ArrayExpress:AT1G58270 | EnsemblPlantsGene:AT1G58270 | RefSeq:AT1G58270 | TAIR:AT1G58270 |
| RefSeq:AT1G58270-TAIR-G | EnsemblPlants:AT1G58270.1 | TAIR:AT1G58270.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | RefSeq:NP_564729.1 | PFAM:PF00917 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50144 | PANTHER:PTHR26379 |
| PANTHER:PTHR26379:SF213 | UniProt:Q9SLV3 | SMART:SM00061 | SUPFAM:SSF49599 | TMHMM:TMhelix | InterPro:TRAF-like |
| UniParc:UPI00000A8A64 | Symbol:ZW9 | : | : | : | : |
Description
ZW9At1g58270/F19C14_8 [Source:UniProtKB/TrEMBL;Acc:Q9SLV3]
Coordinates
chr1:-:21611803..21614169
Molecular Weight (calculated)
45037.7 Da
IEP (calculated)
5.526
GRAVY (calculated)
-0.328
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSEEKKSRN YGSIFVYCFF CFVLIVEVAR FAKPYINLQN LIETEAVVEE GFMAVGNSGN LPCGSSKPSS ASVRAHDEQK LSQAVTTDTR TRPPNSYCVK
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.