Factsheet for AT2G15710.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G22085.1	Thale cress	cytosol	42.47	53.26
AT1G69660.1	Thale cress	cytosol	33.15	52.38
AT3G22080.1	Thale cress	mitochondrion	43.56	50.64
AT1G69650.1	Thale cress	plastid	40.27	50.0
CDY39500	Canola	cytosol	41.37	47.19
Bra023852.1-P	Field mustard	cytosol	41.37	47.19
AT1G65050.1	Thale cress	cytosol, mitochondrion	20.0	45.06
AT1G65370.1	Thale cress	cytosol	27.67	44.49
AT1G65150.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	33.97	41.89
CDY19307	Canola	cytosol	42.74	40.21
AT3G20370.1	Thale cress	extracellular, plasma membrane	35.62	34.3
AT3G20360.1	Thale cress	endoplasmic reticulum, extracellular	33.97	34.16
AT3G20380.1	Thale cress	extracellular, vacuole	30.41	29.6
AT3G46190.2	Thale cress	cytosol	25.21	29.58
KRH68153	Soybean	cytosol	25.21	29.49
AT3G28220.1	Thale cress	cytosol	28.49	28.11
AT4G09770.4	Thale cress	cytosol	23.84	26.93
AT3G17380.1	Thale cress	cytosol	22.47	26.54
AT1G58270.1	Thale cress	golgi, plasma membrane, vacuole	28.77	26.52
AT5G26290.1	Thale cress	extracellular	23.01	25.0
AT5G26260.1	Thale cress	extracellular	23.56	24.5
AT5G26300.1	Thale cress	extracellular	23.01	24.07
AT5G26280.3	Thale cress	plastid	23.84	23.58
AT5G26320.1	Thale cress	vacuole	22.19	23.01
AT4G00780.1	Thale cress	cytosol	17.26	21.07
AT4G09780.1	Thale cress	endoplasmic reticulum, golgi	24.11	20.61
AT2G04190.1	Thale cress	cytosol	22.74	20.19
AT2G04170.1	Thale cress	mitochondrion	23.01	20.0
AT2G32880.1	Thale cress	cytosol	16.44	18.87
AT4G01390.1	Thale cress	cytosol	15.34	18.67
AT2G32870.1	Thale cress	cytosol	17.26	15.14

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.2	EntrezGene:816065	ProteinID:AAD17415.1	ProteinID:AEC06432.1	ArrayExpress:AT2G15710
EnsemblPlantsGene:AT2G15710	RefSeq:AT2G15710	TAIR:AT2G15710	RefSeq:AT2G15710-TAIR-G	EnsemblPlants:AT2G15710.1	TAIR:AT2G15710.1
Unigene:At.52755	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	RefSeq:NP_179173.1	PFAM:PF00917	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF213
UniProt:Q9ZQE3	SMART:SM00061	SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI00000A98FA	:

Description

TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQE3]

Coordinates

chr2:+:6842648..6845103

Molecular Weight (calculated)

42560.6 Da

IEP (calculated)

5.861

GRAVY (calculated)

-0.460

Length

365 amino acids

Sequence
(BLAST)

001: MMCHGRKVKM RDNEMSQIRQ SLIPTGTEVS AGDGERRRCK TPEGQREKVV SDNDFVEEDC VLSKGGELLF GFDITQLLGQ QNWQGDSTIV NNLREHPPSS
101: YSLKINKLSQ LTFDKYESHR FLSGGYNWRL VIYPKGNEKD KGSGFISMYV EFDNTKVSST SPMEVFAYII FFVYNKKENK YFTIQDVEVK RFNALRTVWG
201: LSQVLSLETF NDLENGYTFE GEQCEFGVDV MVASPITKWE VVSFDEKLDI LKFSWSVKDF SVLKEEFYVS ERFSMGGRLW DLQMYPKGDP RRDKKWLSIF
301: LRLSGSETLT VDEKIYVIAH LRVLDPLGNW FRDRNKGWGY LEFLSFSKLR KSYLDLEDTF FPLNL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.