Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G65150.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 79.63 | 43.58 |
| AT1G65370.1 | Thale cress | cytosol | 34.57 | 24.67 |
| AT3G22080.1 | Thale cress | mitochondrion | 43.83 | 22.61 |
| AT3G22085.1 | Thale cress | cytosol | 38.89 | 21.65 |
| AT2G15710.1 | Thale cress | cytosol | 45.06 | 20.0 |
| CDY39500 | Canola | cytosol | 37.65 | 19.06 |
| Bra023852.1-P | Field mustard | cytosol | 37.65 | 19.06 |
| AT1G69650.1 | Thale cress | plastid | 32.72 | 18.03 |
| AT3G20360.1 | Thale cress | endoplasmic reticulum, extracellular | 38.27 | 17.08 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 38.27 | 16.36 |
| CDY19307 | Canola | cytosol | 37.65 | 15.72 |
| AT3G28220.1 | Thale cress | cytosol | 32.72 | 14.32 |
| AT4G09770.4 | Thale cress | cytosol | 28.4 | 14.24 |
| AT3G17380.1 | Thale cress | cytosol | 27.16 | 14.24 |
| KRH68153 | Soybean | cytosol | 27.16 | 14.1 |
| AT1G58270.1 | Thale cress | golgi, plasma membrane, vacuole | 33.95 | 13.89 |
| AT3G46190.2 | Thale cress | cytosol | 26.54 | 13.83 |
| AT1G69660.1 | Thale cress | cytosol | 19.14 | 13.42 |
| AT5G26290.1 | Thale cress | extracellular | 27.78 | 13.39 |
| AT5G26260.1 | Thale cress | extracellular | 29.01 | 13.39 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 30.86 | 13.33 |
| AT5G26320.1 | Thale cress | vacuole | 28.4 | 13.07 |
| AT5G26300.1 | Thale cress | extracellular | 27.78 | 12.89 |
| AT5G26280.3 | Thale cress | plastid | 28.4 | 12.47 |
| AT4G00780.1 | Thale cress | cytosol | 20.37 | 11.04 |
| AT2G04170.1 | Thale cress | mitochondrion | 28.4 | 10.95 |
| AT4G09780.1 | Thale cress | endoplasmic reticulum, golgi | 27.78 | 10.54 |
| AT2G04190.1 | Thale cress | cytosol | 25.93 | 10.22 |
| AT4G01390.1 | Thale cress | cytosol | 17.9 | 9.67 |
| AT2G32880.1 | Thale cress | cytosol | 16.67 | 8.49 |
| AT2G32870.1 | Thale cress | cytosol | 18.52 | 7.21 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | EntrezGene:842813 | UniProt:A0A1P8AW32 | ProteinID:AEE34322.2 | ProteinID:ANM60859.1 |
| ArrayExpress:AT1G65050 | EnsemblPlantsGene:AT1G65050 | RefSeq:AT1G65050 | TAIR:AT1G65050 | RefSeq:AT1G65050-TAIR-G | EnsemblPlants:AT1G65050.1 |
| TAIR:AT1G65050.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| RefSeq:NP_001319323.1 | RefSeq:NP_001323110.1 | PFAM:PF00917 | PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI000848556B | : | : | : |
Description
TRAF-like superfamily protein [Source:TAIR;Acc:AT1G65050]
Coordinates
chr1:-:24164141..24165935
Molecular Weight (calculated)
18264.9 Da
IEP (calculated)
9.902
GRAVY (calculated)
-0.130
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSKASDSAM LKTWRRNPPS SSLVRLSQLA NDKYESPPFS SGGHNWRLVV YPKGNEADNG RGFVSMYVEC LSSTTPPIDV FVYLTFFVFS EEEKRYLSIQ
101: DVEVKRFNSS KTVWGLSQVL PVETLKDRAK GFILSRLFHN PPLLVKFSLF TNSLGVFVIS LS
101: DVEVKRFNSS KTVWGLSQVL PVETLKDRAK GFILSRLFHN PPLLVKFSLF TNSLGVFVIS LS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.