Factsheet for AT1G69650.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G69660.1	Thale cress	cytosol	49.66	63.2
CDY04288	Canola	cytosol	27.21	57.14
AT3G22085.1	Thale cress	cytosol	50.68	51.2
AT3G22080.1	Thale cress	mitochondrion	54.42	50.96
AT1G65370.1	Thale cress	cytosol	32.65	42.29
AT2G15710.1	Thale cress	cytosol	50.0	40.27
AT1G65150.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	40.14	39.86
AT1G65050.1	Thale cress	cytosol, mitochondrion	18.03	32.72
AT3G20360.1	Thale cress	endoplasmic reticulum, extracellular	35.71	28.93
AT3G20370.1	Thale cress	extracellular, plasma membrane	36.73	28.5
AT3G46190.2	Thale cress	cytosol	29.93	28.3
AT3G28220.1	Thale cress	cytosol	35.03	27.84
KRH68153	Soybean	cytosol	28.91	27.24
AT3G17380.1	Thale cress	cytosol	28.57	27.18
AT3G20380.1	Thale cress	extracellular, vacuole	33.33	26.13
AT5G26290.1	Thale cress	extracellular	26.53	23.21
AT4G00780.1	Thale cress	cytosol	23.47	23.08
AT1G58270.1	Thale cress	golgi, plasma membrane, vacuole	30.61	22.73
AT4G09770.4	Thale cress	cytosol	24.83	22.6
AT5G26320.1	Thale cress	vacuole	25.51	21.31
AT5G26260.1	Thale cress	extracellular	24.83	20.8
AT5G26300.1	Thale cress	extracellular	24.49	20.63
AT5G26280.3	Thale cress	plastid	24.83	19.78
AT4G01390.1	Thale cress	cytosol	19.73	19.33
AT2G04170.1	Thale cress	mitochondrion	27.55	19.29
AT2G04190.1	Thale cress	cytosol	26.19	18.73
AT2G32880.1	Thale cress	cytosol	20.07	18.55
AT4G09780.1	Thale cress	endoplasmic reticulum, golgi	23.47	16.16
AT2G32870.1	Thale cress	cytosol	19.39	13.7

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.2	EntrezGene:843301	ProteinID:AAG12702.1	ProteinID:AEE34959.1	ArrayExpress:AT1G69650
EnsemblPlantsGene:AT1G69650	RefSeq:AT1G69650	TAIR:AT1G69650	RefSeq:AT1G69650-TAIR-G	EnsemblPlants:AT1G69650.1	TAIR:AT1G69650.1
Unigene:At.52451	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
RefSeq:NP_177123.1	PFAM:PF00917	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF213	UniProt:Q9FWZ3
SMART:SM00061	SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI000009EABD	:	:

Description

TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9FWZ3]

Coordinates

chr1:-:26197498..26198821

Molecular Weight (calculated)

33719.2 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.434

Length

294 amino acids

Sequence
(BLAST)

001: MGASCSAPVS STIKKNWRDH PPSSYSLKIH NFSQLEKTTS FSGHKYQSRL FSSGDITGNV KDNGSGFISM YVELDSSSLM ESKPPTEVFA ELRFFVYNKK
101: QNKYFTKDVE IKRFDALKMV WGLPKGNECE FGVDVIVAPP LTNWEILSFH DEKLSYPKVT WSVKNFSQWK ENECSKPNRF SIGGREWVLK LFPKGNSRAK
201: GKYLSVFLYL ADNETLKPDE KIFTQVVVRI LNPLGSNHVA SRLNYWHKGS NFGYGWCKFL SLDKIRKTYL DKEDTLMIEA EFEVVSATKF STII

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.