Factsheet for AT5G26260.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G26280.3	Thale cress	plastid	83.76	79.67
AT5G26300.1	Thale cress	extracellular	77.21	77.65
AT5G26320.1	Thale cress	vacuole	74.36	74.15
AT5G26290.1	Thale cress	extracellular	66.67	69.64
AT2G04170.1	Thale cress	mitochondrion	68.95	57.62
AT2G04190.1	Thale cress	cytosol	61.82	52.8
AT4G09770.4	Thale cress	cytosol	35.9	39.01
AT4G09780.1	Thale cress	endoplasmic reticulum, golgi	36.75	30.21
KRH68153	Soybean	cytosol	26.78	30.13
AT3G17380.1	Thale cress	cytosol	26.5	30.1
AT3G22085.1	Thale cress	cytosol	24.5	29.55
AT1G65050.1	Thale cress	cytosol, mitochondrion	13.39	29.01
AT3G20360.1	Thale cress	endoplasmic reticulum, extracellular	28.49	27.55
AT3G22080.1	Thale cress	mitochondrion	24.22	27.07
AT1G65150.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	22.51	26.69
AT3G20370.1	Thale cress	extracellular, plasma membrane	28.49	26.39
AT1G65370.1	Thale cress	cytosol	16.81	25.99
AT3G28220.1	Thale cress	cytosol	26.78	25.41
AT3G46190.2	Thale cress	cytosol	22.51	25.4
AT3G20380.1	Thale cress	extracellular, vacuole	27.07	25.33
AT1G69650.1	Thale cress	plastid	20.8	24.83
AT1G69660.1	Thale cress	cytosol	16.24	24.68
AT4G01390.1	Thale cress	cytosol	20.23	23.67
AT2G32880.1	Thale cress	cytosol	21.37	23.58
AT2G15710.1	Thale cress	cytosol	24.5	23.56
AT4G00780.1	Thale cress	cytosol	19.94	23.41
AT1G58270.1	Thale cress	golgi, plasma membrane, vacuole	23.36	20.71
AT2G32870.1	Thale cress	cytosol	21.65	18.27

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.2	EntrezGene:832695	ProteinID:AAC26239.1	ProteinID:AED93542.1	EMBL:AF370133
ArrayExpress:AT5G26260	EnsemblPlantsGene:AT5G26260	RefSeq:AT5G26260	TAIR:AT5G26260	RefSeq:AT5G26260-TAIR-G	EnsemblPlants:AT5G26260.1
TAIR:AT5G26260.1	EMBL:AY051023	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	RefSeq:NP_568483.1	UniProt:O81493	PFAM:PF00917
PO:PO:0000293	PO:PO:0005052	PO:PO:0009005	PO:PO:0020100	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF214	SMART:SM00061	SUPFAM:SSF49599	SignalP:SignalP-noTM	InterPro:TRAF-like	UniParc:UPI000009E63D

Description

F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]

Coordinates

chr5:+:9200271..9202461

Molecular Weight (calculated)

39828.4 Da

IEP (calculated)

9.624

GRAVY (calculated)

-0.296

Length

351 amino acids

Sequence
(BLAST)

001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.