Factsheet for AT3G46190.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99123	Canola	cytosol	34.41	55.73
CDX86065	Canola	cytosol	50.48	49.84
AT1G58270.1	Thale cress	golgi, plasma membrane, vacuole	45.02	35.35
AT3G28220.1	Thale cress	cytosol	39.87	33.51
AT3G22085.1	Thale cress	cytosol	31.19	33.33
AT3G22080.1	Thale cress	mitochondrion	33.12	32.8
AT1G69660.1	Thale cress	cytosol	24.12	32.47
AT3G20370.1	Thale cress	extracellular, plasma membrane	36.66	30.08
AT3G20360.1	Thale cress	endoplasmic reticulum, extracellular	35.05	30.03
AT1G69650.1	Thale cress	plastid	28.3	29.93
AT3G20380.1	Thale cress	extracellular, vacuole	35.37	29.33
AT1G65370.1	Thale cress	cytosol	20.58	28.19
KRH68153	Soybean	cytosol	27.97	27.88
AT1G65050.1	Thale cress	cytosol, mitochondrion	13.83	26.54
AT2G15710.1	Thale cress	cytosol	29.58	25.21
AT1G65150.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	23.79	25.0
AT3G17380.1	Thale cress	cytosol	24.76	24.92
AT4G09770.4	Thale cress	cytosol	25.4	24.46
AT5G26320.1	Thale cress	vacuole	26.05	23.01
AT2G32880.1	Thale cress	cytosol	23.47	22.96
AT5G26290.1	Thale cress	extracellular	24.76	22.92
AT5G26280.3	Thale cress	plastid	27.01	22.76
AT5G26260.1	Thale cress	extracellular	25.4	22.51
AT4G01390.1	Thale cress	cytosol	21.22	22.0
AT5G26300.1	Thale cress	extracellular	24.44	21.78
AT4G00780.1	Thale cress	cytosol	20.58	21.4
AT2G04170.1	Thale cress	mitochondrion	25.08	18.57
AT2G04190.1	Thale cress	cytosol	23.79	18.0
AT4G09780.1	Thale cress	endoplasmic reticulum, golgi	22.83	16.63
AT2G32870.1	Thale cress	cytosol	22.19	16.59

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.2	EntrezGene:823764	UniProt:A0A1I9LN71	ProteinID:ANM64029.1	ArrayExpress:AT3G46190
EnsemblPlantsGene:AT3G46190	RefSeq:AT3G46190	TAIR:AT3G46190	RefSeq:AT3G46190-TAIR-G	EnsemblPlants:AT3G46190.2	Unigene:At.53785
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
RefSeq:NP_001326080.1	PFAM:PF00917	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF213	SMART:SM00061
SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI0008491C2B	SEG:seg	:	:

Description

TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN71]

Coordinates

chr3:+:16965105..16967345

Molecular Weight (calculated)

35763.6 Da

IEP (calculated)

4.139

GRAVY (calculated)

-0.499

Length

311 amino acids

Sequence
(BLAST)

001: MEKDAIKEEE IISNDLLWKK ADIKEESDIS EGSQKHEKLK TALLPYWRER PPTTYSVTFE SFGKMMELVN NGYYESLPFT VDGINWTFKI YPNGNSDTTR
101: GLIYLYVKID DSSITDPPLD VYAEIKFFVY NYGISEYYTY QEVEPVKFDS VQQEWGRWID VFVAQRNKSE VFSYDENISN PVFTWSLPNF STLTLDSYTS
201: DPFSSGDRNW VLKVYPNGDG VGKDNSLSLY LLSESNEKNY VRATLRVLNQ IGSDNVEKPV EGWPNAAENG WGYQEFIPLA DLQDATKGFV VDDLLEVEVE
301: IMAISKQTPI N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.