Factsheet for Bra003837.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
extracellular 1
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003836.1-P	Field mustard	extracellular, golgi	44.21	65.64
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	39.17	61.4
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	69.14	60.99
AT1G58270.1	Thale cress	golgi, plasma membrane, vacuole	62.91	53.54
Bra007873.1-P	Field mustard	cytosol	32.34	34.6
Bra000640.1-P	Field mustard	cytosol	32.64	34.38
Bra003989.1-P	Field mustard	plastid	28.49	33.1
Bra040903.1-P	Field mustard	extracellular, vacuole	36.8	32.46
Bra001785.1-P	Field mustard	nucleus	26.11	31.21
Bra040904.1-P	Field mustard	extracellular, vacuole	35.31	31.15
Bra001786.1-P	Field mustard	extracellular, golgi	36.8	31.08
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	32.64	30.81
Bra035787.1-P	Field mustard	vacuole	36.2	30.2
KRH68153	Soybean	cytosol	27.6	29.81
Bra003990.1-P	Field mustard	plastid	26.41	29.67
Bra004405.1-P	Field mustard	plastid	31.45	28.96
Bra001660.1-P	Field mustard	cytosol	24.63	28.92
Bra020540.1-P	Field mustard	cytosol	24.93	28.09
Bra009894.1-P	Field mustard	cytosol	21.07	27.84
Bra039646.1-P	Field mustard	plastid	36.5	27.77
Bra031322.1-P	Field mustard	cytosol, plastid	25.52	27.74
Bra023852.1-P	Field mustard	cytosol	26.11	27.5
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.71	25.71
Bra036573.1-P	Field mustard	extracellular	25.52	24.57
Bra020541.1-P	Field mustard	extracellular	24.93	23.93
Bra036572.1-P	Field mustard	extracellular	24.33	23.84
Bra034175.1-P	Field mustard	cytosol, plastid	23.44	23.65
Bra005554.1-P	Field mustard	cytosol	20.77	22.73
Bra022923.1-P	Field mustard	cytosol	20.18	22.22
Bra037411.1-P	Field mustard	mitochondrion	18.4	21.68
Bra037358.1-P	Field mustard	cytosol	17.51	20.49
Bra007874.1-P	Field mustard	cytosol	24.04	20.25
Bra001787.1-P	Field mustard	endoplasmic reticulum	37.09	13.44

Protein Annotations

EnsemblPlants:Bra003837.1	EnsemblPlants:Bra003837.1-P	EnsemblPlantsGene:Bra003837	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SEG:seg	SMART:SM00061	SUPFAM:SSF49599
UniParc:UPI0002541724	UniProt:M4CI04	MapMan:35.2	:	:	:

Description

AT1G58270 (E=2e-111) ZW9 | ZW9

Coordinates

chrA07:+:15292198..15293857

Molecular Weight (calculated)

37758.4 Da

IEP (calculated)

7.544

GRAVY (calculated)

-0.361

Length

337 amino acids

Sequence
(BLAST)

001: METEAVMEQG LLDVGILPCN LKSSVSVPAR NHQKLSTTVR EETRTRPPNS YCVKFESFAT MSKLVAGNGD KYESRPFSAG GYNWTFLIYP NVNKPVGSGG
101: YVSLYVKIDN SSFIATQTEV YAWIKFLTYK STTDTYHELH ATEAQRFHLF KQEYGMLTFL EIGYYQNPAY GFIFNGGQSV FGVDIVVSKP PATWEDVAYE
201: ENIRDPVLDW RITNFSTRDK VSYTSDTFSS GGRNWVLKVY PNGAGSATGN SLSLYLLSAS NEKGYVKAKF RVINQTPSKN VEKQVDGWPN AKENGWGVDT
301: LIPLADIKDP SKGFLVKDTI RFEVEILAFS RTNSISN

Best Arabidopsis Sequence Match ( AT1G58270.1 )
(BLAST)

001: MYSEEKKSRN YGSIFVYCFF CFVLIVEVAR FAKPYINLQN LIETEAVVEE GFMAVGNSGN LPCGSSKPSS ASVRAHDEQK LSQAVTTDTR TRPPNSYCVK
101: FQSFVTMAKQ VKENGGKYES RPFSVGGYNW TLLIYPVIYI PTDSGGYVSI YVRVDNSSLI TNPKDVYAEI TFLAYKSSTD KYQISQETEA QRFHLFKQQW
201: GLLQFLPIYY FENPAYGYFF EGESVVFGVD INIVKPFENW EVFSNEQNIR DPIFEWRLTK FSTRFLDSYT SDSFSSGGRN WALKVYPNGV GNATGNSLSL
301: YLLSDQSNDK GYVEAKLRVI DQIQSNNFEK KVAAWPNATE NGWGFDRFLS FADIKNTSKG FLVNDTLKLE VQILSFSKTD YYSHQSSLNV LTGDST

Arabidopsis Description

ZW9At1g58270/F19C14_8 [Source:UniProtKB/TrEMBL;Acc:Q9SLV3]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.