Factsheet for Bra001786.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82251	Canola	extracellular, golgi	100.0	100.0
Bra040904.1-P	Field mustard	extracellular, vacuole	62.91	65.71
Bra040903.1-P	Field mustard	extracellular, vacuole	61.15	63.87
AT3G20370.1	Thale cress	extracellular, plasma membrane	60.65	63.85
Bra035787.1-P	Field mustard	vacuole	60.9	60.15
Bra001785.1-P	Field mustard	nucleus	41.6	58.87
Bra000640.1-P	Field mustard	cytosol	45.11	56.25
Bra032150.1-P	Field mustard	endoplasmic reticulum, vacuole	47.87	53.5
AT3G20380.1	Thale cress	extracellular, vacuole	48.37	51.47
Bra007873.1-P	Field mustard	cytosol	32.33	40.95
Bra003989.1-P	Field mustard	plastid	26.82	36.9
Bra003837.1-P	Field mustard	cytosol	31.08	36.8
Bra031322.1-P	Field mustard	cytosol, plastid	28.57	36.77
Bra004405.1-P	Field mustard	plastid	33.33	36.34
Bra003990.1-P	Field mustard	plastid	27.32	36.33
Bra023852.1-P	Field mustard	cytosol	29.07	36.25
Bra001660.1-P	Field mustard	cytosol	24.06	33.45
Bra009894.1-P	Field mustard	cytosol	21.05	32.94
Bra003836.1-P	Field mustard	extracellular, golgi	18.3	32.16
Bra034175.1-P	Field mustard	cytosol, plastid	26.57	31.74
Bra036573.1-P	Field mustard	extracellular	27.32	31.14
Bra015981.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	29.57	30.89
Bra009895.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	27.07	30.86
Bra036572.1-P	Field mustard	extracellular	25.81	29.94
Bra020541.1-P	Field mustard	extracellular	26.32	29.91
Bra003839.1-P	Field mustard	cytosol, extracellular, plasma membrane	16.04	29.77
Bra020540.1-P	Field mustard	cytosol	22.31	29.77
KRH68153	Soybean	cytosol	23.06	29.49
Bra039646.1-P	Field mustard	plastid	31.08	27.99
Bra001787.1-P	Field mustard	endoplasmic reticulum	62.41	26.77
Bra037411.1-P	Field mustard	mitochondrion	19.05	26.57
Bra007874.1-P	Field mustard	cytosol	25.06	25.0
Bra037358.1-P	Field mustard	cytosol	17.54	24.31
Bra022923.1-P	Field mustard	cytosol	17.04	22.22
Bra005554.1-P	Field mustard	cytosol	16.79	21.75

Protein Annotations

EnsemblPlants:Bra001786.1	EnsemblPlants:Bra001786.1-P	EnsemblPlantsGene:Bra001786	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR26379
PANTHER:PTHR26379:SF213	PFAM:PF00917	PFscan:PS50144	SEG:seg	SignalP:SignalP-TM	SMART:SM00061
SUPFAM:SSF49599	TMHMM:TMhelix	UniParc:UPI00025405C5	UniProt:M4CC56	MapMan:35.1	:

Description

AT3G20370 (E=2e-133) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA03:+:18437850..18448741

Molecular Weight (calculated)

45788.0 Da

IEP (calculated)

6.890

GRAVY (calculated)

-0.336

Length

399 amino acids

Sequence
(BLAST)

001: MKSYYTYTIY VVYLLFCLLI TSASAQSLIR QSTDDRNTPL QQENGAKAVS ILGEAHYLDK DDLEISSSDY KVSPSNQVTG MRSRPPMSYS LKMESFNTLL
101: QSNNTERYES RPFPVGGYNW SLIVYPNGNR EDSGSGFISL YVAIDNSTLV SSHQEVFADL RFYVFKRTER KFFTVQDTNV WRYNIFKTMW GFPRVLPLDT
201: FRNPSNGYLF NGDHCEFGVD VTIHTPFQRS ELFTVARNFP NPRFTWNIQR FSTLLGETYF SDVFSIGGRN WNIQVHPSGA VTGEGRALSM YLLLNANERF
301: RPYEKIYVRA QLRVLNQRAS SQWRTIERPI DHWFTGPGLG WGYDEFVPLA DLRDPERGYL VNDKLMVQVE MEAISSTSFG TGASSFLVEL TPVHPLALP

Best Arabidopsis Sequence Match ( AT3G20370.1 )
(BLAST)

001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS

Arabidopsis Description

AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.