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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
 cytosol: 16847873
cytosol: 19562800
msms PMID: 19562800 doi
P Jolivet, C Boulard, A Bellamy, C Larré, M Barre, H Rogniaux, S d'Andréa, T Chardot, N Nesi
NRA, UMR 206, Chimie Biologique, Thiverval-Grignon, France. jolivet@grignon.inra.fr
msms PMID: 16847873 doi
V Katavic, GK Agrawal, M Hajduch, SL Harris, JJ Thelen
University of Missouri-Columbia, Department of Biochemistry, Columbia 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023886.1-P Field mustard endoplasmic reticulum 100.0 100.0
CDY37297 Canola cytosol 82.95 95.84
CDY53522 Canola cytosol 54.92 94.46
CDY45300 Canola cytosol 81.63 94.31
CDY53521 Canola cytoskeleton, endoplasmic reticulum, vacuole 84.85 89.78
AT3G21370.1 Thale cress endoplasmic reticulum 89.02 89.18
CDY41625 Canola endoplasmic reticulum, extracellular, vacuole 32.95 71.9
CDY49904 Canola endoplasmic reticulum 71.59 71.86
CDY40155 Canola endoplasmic reticulum 71.59 71.59
CDY52969 Canola endoplasmic reticulum 71.59 71.59
CDY62094 Canola endoplasmic reticulum 69.32 69.85
CDX73966 Canola endoplasmic reticulum 68.37 68.89
CDY44691 Canola endoplasmic reticulum 66.86 67.37
CDY44692 Canola endoplasmic reticulum 66.67 67.18
CDY41624 Canola endoplasmic reticulum 66.48 66.98
CDY07912 Canola endoplasmic reticulum 53.98 66.59
CDY13522 Canola endoplasmic reticulum 68.94 66.18
CDY39071 Canola endoplasmic reticulum 68.94 66.18
CDY21175 Canola vacuole 55.68 56.43
CDY21174 Canola cytosol, endoplasmic reticulum, vacuole 29.17 56.41
CDY29947 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 56.25 54.0
CDY47681 Canola mitochondrion 43.37 52.28
CDY47680 Canola endoplasmic reticulum, vacuole 48.67 49.52
CDY39072 Canola cytosol, endoplasmic reticulum, vacuole 34.47 48.02
CDY69599 Canola cytosol, mitochondrion, vacuole 31.44 47.43
VIT_13s0064g00520.t01 Wine grape endoplasmic reticulum, vacuole 28.41 47.17
CDX71838 Canola cytosol, nucleus, vacuole 47.54 46.57
CDY58095 Canola cytosol, nucleus, vacuole 47.54 46.57
Os08t0509400-01 Rice endoplasmic reticulum, vacuole 43.56 46.0
CDY30473 Canola endoplasmic reticulum, vacuole 46.4 45.97
CDX74659 Canola endoplasmic reticulum, vacuole 46.21 45.78
CDY23437 Canola endoplasmic reticulum, vacuole 46.21 45.78
CDY47682 Canola endoplasmic reticulum, vacuole 46.59 45.64
CDY17847 Canola cytosol, nucleus, vacuole 47.92 44.7
CDX79758 Canola mitochondrion 48.48 44.06
KRH29659 Soybean endoplasmic reticulum, plasma membrane, vacuole 43.56 43.89
CDX89050 Canola endoplasmic reticulum, vacuole 45.64 41.7
CDY42667 Canola endoplasmic reticulum, vacuole 45.45 41.52
CDY47683 Canola endoplasmic reticulum, vacuole 45.08 40.48
CDX74657 Canola endoplasmic reticulum, vacuole 44.13 39.76
CDX74658 Canola cytosol, endoplasmic reticulum, vacuole 44.7 39.66
Zm00001d041168_P001 Maize plastid 38.07 39.03
CDY23436 Canola endoplasmic reticulum, vacuole 42.99 38.94
CDY52547 Canola cytosol 30.87 38.53
OQU78971 Sorghum plastid 40.34 38.04
KXG23299 Sorghum plastid 35.98 37.92
TraesCS2B01G600000.1 Wheat cytosol, plastid, vacuole 30.3 37.65
TraesCS2B01G600100.1 Wheat cytosol, mitochondrion, vacuole 30.3 37.65
Zm00001d041173_P001 Maize plasma membrane 39.58 37.59
KRH43441 Soybean endoplasmic reticulum, extracellular, vacuole 31.06 37.36
CDY12156 Canola cytosol 11.55 37.2
CDY50402 Canola cytosol 11.55 37.2
Zm00001d024891_P001 Maize plastid 39.02 37.18
EES15867 Sorghum plastid 39.77 37.17
Zm00001d024037_P005 Maize plastid 39.39 36.94
CDY19167 Canola endoplasmic reticulum, vacuole 41.67 36.79
CDY15268 Canola endoplasmic reticulum, vacuole 35.23 36.76
CDY23784 Canola endoplasmic reticulum, vacuole 41.48 36.62
CDY00802 Canola endoplasmic reticulum, vacuole 20.45 36.61
Zm00001d023994_P002 Maize plastid 39.02 36.4
Zm00001d041776_P001 Maize extracellular 39.02 36.33
CDY23576 Canola endoplasmic reticulum, vacuole 26.14 36.22
CDY12153 Canola endoplasmic reticulum, vacuole 39.2 36.19
Zm00001d041777_P001 Maize plastid 39.02 36.14
CDX89146 Canola endoplasmic reticulum, extracellular, vacuole 33.9 35.94
CDX93964 Canola endoplasmic reticulum, extracellular, vacuole 33.52 35.54
EES16911 Sorghum cytosol 20.83 35.48
CDX77376 Canola endoplasmic reticulum, vacuole 31.63 35.46
KRH29658 Soybean endoplasmic reticulum, plasma membrane, vacuole 21.21 35.44
CDY71863 Canola cytosol, vacuole 28.22 35.31
CDX76387 Canola vacuole 31.06 35.12
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 33.52 35.05
CDY11446 Canola endoplasmic reticulum, vacuole 33.52 35.05
CDY55533 Canola cytosol 34.28 35.01
CDY15703 Canola endoplasmic reticulum, vacuole 32.01 34.99
Zm00001d024000_P002 Maize plastid 37.88 34.97
CDX79092 Canola cytosol, nucleus, vacuole 31.06 34.89
CDX76659 Canola endoplasmic reticulum, plasma membrane, vacuole 33.14 34.86
CDY11445 Canola endoplasmic reticulum, extracellular, vacuole 33.33 34.78
CDY44014 Canola endoplasmic reticulum, vacuole 33.33 34.65
CDY55219 Canola endoplasmic reticulum, vacuole 33.9 34.62
TraesCS5B01G418000.1 Wheat plastid 36.74 34.52
CDX83559 Canola endoplasmic reticulum, vacuole 33.33 34.51
CDY15109 Canola endoplasmic reticulum, vacuole 16.67 34.51
CDX98706 Canola cytosol 19.32 34.46
CDY25325 Canola endoplasmic reticulum, vacuole 31.25 34.45
TraesCSU01G036600.1 Wheat plastid 36.74 34.4
CDY47163 Canola endoplasmic reticulum, vacuole 33.33 34.11
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 33.52 34.1
CDX93043 Canola endoplasmic reticulum, vacuole 31.25 34.09
TraesCS2B01G600200.1 Wheat plastid 36.93 34.03
TraesCS2B01G599800.1 Wheat extracellular 36.55 33.92
CDY68226 Canola cytosol, vacuole 28.03 33.79
TraesCS2B01G599900.3 Wheat plastid 36.17 33.57
TraesCS2D01G594400.1 Wheat extracellular, plasma membrane 35.98 33.33
CDX89938 Canola mitochondrion, nucleus, plastid, vacuole 16.86 33.09
CDY65784 Canola cytosol, nucleus, vacuole 25.19 32.84
CDX94056 Canola vacuole 32.58 32.51
CDX95732 Canola plastid 33.52 32.3
CDY07263 Canola endoplasmic reticulum, vacuole 30.87 32.15
CDX76660 Canola endoplasmic reticulum, plastid, vacuole 21.97 32.13
CDY23438 Canola endoplasmic reticulum, vacuole 48.67 31.5
KRH25456 Soybean endoplasmic reticulum, mitochondrion, vacuole 27.27 30.84
CDX77373 Canola cytosol, endoplasmic reticulum, vacuole 32.39 30.59
CDY03953 Canola endoplasmic reticulum, vacuole 13.26 30.3
CDY30474 Canola cytosol 45.64 30.09
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 33.14 25.33
CDX83321 Canola endoplasmic reticulum, golgi, plasma membrane 28.22 24.47
CDX74660 Canola endoplasmic reticulum, vacuole 50.38 21.04
CDY27473 Canola nucleus 29.92 20.31
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078J5J3UniProt:A0A078J5J3EnsemblPlants:CDY59555ProteinID:CDY59555
ProteinID:CDY59555.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0008422GO:GO:0016787GO:GO:0016798GO:GO:0102483EnsemblPlantsGene:GSBRNA2T00027371001
InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CSInterPro:Glycoside_hydrolase_SFPFAM:PF00232PRINTS:PR00131ScanProsite:PS00653
PANTHER:PTHR10353PANTHER:PTHR10353:SF81SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000254454ASEG:seg
Description
BnaC01g43700DBnaC01g43700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5J3]
Coordinates
chrLK033778:-:30720..34590
Molecular Weight (calculated)
60248.2 Da
IEP (calculated)
6.868
GRAVY (calculated)
-0.492
Length
528 amino acids
Sequence
(BLAST)
001: MKFPLLGLLL LVTLVGSPTR AEEGPVCPKT ETLSRASFPE GFMFGTATAS YQVEGAVNEG CRGPSLWDIY TKKFPHRVKN HNADVAVDFY HRFREDIKLM
101: KKLNTDAFRL SIAWPRIFPH GRMEKGISKE GVQFYHDLID ELLKNDLTPL VTIFHWDMPA DLEDEYGGFL SERVVPDFVE YANFTFHEYG DKVKNWITFN
201: EPWVFSRSGY DVGKKAPGRC SPYIKDFGHL CQDGRSGFEA YVVSHNLLVS HAEAVDAFRK CEKCKGGKIG IAHSPAWFEP EDVEGGQRTV DRVLDFIMGW
301: HLDPTTYGDY PQSMKDAVGA RLPKFTKAQK AKLKGSADFV GINYYSSFYA KASEKPDYRQ PSWATDSLVE FEPKTVDGSV KIGSQPSTAK MAVYAAGLRK
401: LVKYIKDRYG NPEIIITENG YGEDLGEKDT DHSVALNDHN RKYYHQRHLL ALHQAICEDK VNVTSYFVWS LMDNFEWQDG YTARFGLYYI DFQNNLTRME
501: KESAKWFSEF LKPGLKQKSS KSTFSEEL
Best Arabidopsis Sequence Match ( AT3G21370.1 )
(BLAST)
001: MKIPLLGLLL LISLVGSPTR AEEGPVCPKT ETLSRASFPE GFMFGTATAA FQVEGAVNEG CRGPSLWDIY TKKFPHRVKN HNADEAVDFY HRYKEDIQLM
101: KKLNTDGFRL SISWPRIFPH GRMEKGISKE GVQFYHDLID ELLKNDITPL VTVFHWDTPA DLEDEYGGFL SERIVPDFVE YANFTFHEYG DKVKNWITFN
201: EPWVFSRSGY DVGKKAPGRC SPYVKEFGKL CQDGRSGFEP YVVSHNLLVG HAEAVDAFRK CEKCKGGKIG IAHSPAWFEP EDVEGGQATV NRVLDFVIGW
301: HLDPTTFGDY PQSMKDAVGS RLPRFTKAQK AKLKDSTDFV GINYYTSFFA KADQKVDSRN PTWATDALVE FEPKTVDGSI KIGSQPNTAK MAVYAKGLRK
401: LMKYIKDRYN SPEIIITENG YGEDLGDKDT DLSVALNDHN RKYYLQRHLL ALNEAICEDK VNVTSYFLWS LMDNFEWQDG YTARFGVYYI DFKNNLTRME
501: KESAKWLSEF LKPGLKPSKS SKLHEEL
Arabidopsis Description
BGLU19Beta-glucosidase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIF9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.