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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44691 Canola endoplasmic reticulum 98.35 45.42
CDY41624 Canola endoplasmic reticulum 97.11 44.85
CDY44692 Canola endoplasmic reticulum 96.28 44.47
Bra029755.1-P Field mustard endoplasmic reticulum 86.78 42.86
CDX73966 Canola endoplasmic reticulum 90.91 41.98
CDY62094 Canola endoplasmic reticulum 89.67 41.41
CDY15109 Canola endoplasmic reticulum, vacuole 40.5 38.43
CDY07912 Canola endoplasmic reticulum 67.77 38.32
AT5G28510.1 Thale cress endoplasmic reticulum 82.23 37.34
VIT_13s0064g00520.t01 Wine grape endoplasmic reticulum, vacuole 47.93 36.48
CDY00802 Canola endoplasmic reticulum, vacuole 43.8 35.93
CDY53521 Canola cytoskeleton, endoplasmic reticulum, vacuole 70.66 34.27
CDY59555 Canola cytosol 71.9 32.95
CDY40155 Canola endoplasmic reticulum 71.07 32.58
CDY52969 Canola endoplasmic reticulum 70.66 32.39
CDY49904 Canola endoplasmic reticulum 70.25 32.32
KRH29658 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.91 31.33
CDY69599 Canola cytosol, mitochondrion, vacuole 44.63 30.86
CDY47681 Canola mitochondrion 54.13 29.91
CDY13522 Canola endoplasmic reticulum 67.77 29.82
CDY39071 Canola endoplasmic reticulum 67.77 29.82
CDY23576 Canola endoplasmic reticulum, vacuole 42.56 27.03
CDY21175 Canola vacuole 55.79 25.91
CDY29947 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 56.2 24.73
CDY37297 Canola cytosol 45.87 24.29
CDY45300 Canola cytosol 45.87 24.29
CDY47680 Canola endoplasmic reticulum, vacuole 52.07 24.28
KRH43441 Soybean endoplasmic reticulum, extracellular, vacuole 43.8 24.15
Os08t0509400-01 Rice endoplasmic reticulum, vacuole 48.35 23.4
KRH25456 Soybean endoplasmic reticulum, mitochondrion, vacuole 45.04 23.34
KRH29659 Soybean endoplasmic reticulum, plasma membrane, vacuole 50.0 23.09
CDX74659 Canola endoplasmic reticulum, vacuole 50.83 23.08
CDY30473 Canola endoplasmic reticulum, vacuole 50.83 23.08
CDY47682 Canola endoplasmic reticulum, vacuole 50.83 22.82
CDY23437 Canola endoplasmic reticulum, vacuole 50.0 22.7
CDX71838 Canola cytosol, nucleus, vacuole 50.41 22.63
CDY58095 Canola cytosol, nucleus, vacuole 50.41 22.63
CDX77376 Canola endoplasmic reticulum, vacuole 43.39 22.29
CDX89050 Canola endoplasmic reticulum, vacuole 52.48 21.97
CDY42667 Canola endoplasmic reticulum, vacuole 52.07 21.8
KXG23299 Sorghum plastid 44.63 21.56
CDY17847 Canola cytosol, nucleus, vacuole 50.41 21.55
CDX79758 Canola mitochondrion 50.41 21.0
CDY15268 Canola endoplasmic reticulum, vacuole 42.56 20.36
CDX74657 Canola endoplasmic reticulum, vacuole 48.76 20.14
CDY44014 Canola endoplasmic reticulum, vacuole 42.15 20.08
EES15867 Sorghum plastid 46.69 20.0
CDY47683 Canola endoplasmic reticulum, vacuole 48.35 19.9
OQU78971 Sorghum plastid 45.87 19.82
CDY12153 Canola endoplasmic reticulum, vacuole 46.69 19.76
CDY23436 Canola endoplasmic reticulum, vacuole 47.52 19.73
CDY15703 Canola endoplasmic reticulum, vacuole 39.26 19.67
CDX93043 Canola endoplasmic reticulum, vacuole 39.26 19.63
Zm00001d041168_P001 Maize plastid 41.74 19.61
CDY55533 Canola cytosol 41.74 19.54
CDX76659 Canola endoplasmic reticulum, plasma membrane, vacuole 40.5 19.52
CDX74658 Canola cytosol, endoplasmic reticulum, vacuole 47.93 19.5
Zm00001d024891_P001 Maize plastid 44.63 19.49
CDX76387 Canola vacuole 37.6 19.49
CDX89146 Canola endoplasmic reticulum, extracellular, vacuole 40.08 19.48
CDX93964 Canola endoplasmic reticulum, extracellular, vacuole 40.08 19.48
CDY11446 Canola endoplasmic reticulum, vacuole 40.5 19.41
CDY11445 Canola endoplasmic reticulum, extracellular, vacuole 40.5 19.37
CDY19167 Canola endoplasmic reticulum, vacuole 47.52 19.23
Zm00001d041173_P001 Maize plasma membrane 43.8 19.06
CDY25325 Canola endoplasmic reticulum, vacuole 37.6 19.0
CDY23784 Canola endoplasmic reticulum, vacuole 46.69 18.9
Zm00001d041776_P001 Maize extracellular 44.21 18.87
CDX95732 Canola plastid 42.56 18.8
TraesCS5B01G418000.1 Wheat plastid 43.39 18.68
CDY53522 Canola cytosol 23.55 18.57
Zm00001d024000_P002 Maize plastid 43.8 18.53
Zm00001d024037_P005 Maize plastid 42.98 18.47
TraesCSU01G036600.1 Wheat plastid 42.98 18.44
CDX83559 Canola endoplasmic reticulum, vacuole 38.84 18.43
Zm00001d041777_P001 Maize plastid 43.39 18.42
TraesCS2B01G600200.1 Wheat plastid 43.39 18.32
TraesCS2B01G599800.1 Wheat extracellular 42.98 18.28
Zm00001d023994_P002 Maize plastid 42.56 18.2
TraesCS2B01G599900.3 Wheat plastid 42.56 18.1
CDY47163 Canola endoplasmic reticulum, vacuole 38.02 17.83
TraesCS2D01G594400.1 Wheat extracellular, plasma membrane 41.74 17.72
CDY07263 Canola endoplasmic reticulum, vacuole 36.36 17.36
CDY55219 Canola endoplasmic reticulum, vacuole 36.78 17.21
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 36.78 17.15
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 35.54 17.03
CDX79092 Canola cytosol, nucleus, vacuole 33.06 17.02
CDX77373 Canola cytosol, endoplasmic reticulum, vacuole 38.84 16.82
CDX83321 Canola endoplasmic reticulum, golgi, plasma membrane 41.74 16.58
CDY52547 Canola cytosol 28.51 16.31
CDY71863 Canola cytosol, vacuole 27.69 15.88
CDX94056 Canola vacuole 32.64 14.93
TraesCS2B01G600100.1 Wheat cytosol, mitochondrion, vacuole 26.03 14.82
TraesCS2B01G600000.1 Wheat cytosol, plastid, vacuole 25.62 14.59
CDY23438 Canola endoplasmic reticulum, vacuole 48.35 14.34
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 38.02 13.31
CDY68226 Canola cytosol, vacuole 23.97 13.24
CDY30474 Canola cytosol 42.56 12.86
CDY65784 Canola cytosol, nucleus, vacuole 21.07 12.59
CDX74660 Canola endoplasmic reticulum, vacuole 54.13 10.36
CDY27473 Canola nucleus 32.64 10.15
CDY03953 Canola endoplasmic reticulum, vacuole 9.5 9.96
CDX76660 Canola endoplasmic reticulum, plastid, vacuole 13.64 9.14
CDY39072 Canola cytosol, endoplasmic reticulum, vacuole 8.68 5.54
EES16911 Sorghum cytosol 2.89 2.26
CDY21174 Canola cytosol, endoplasmic reticulum, vacuole 1.65 1.47
CDX98706 Canola cytosol 1.65 1.35
CDX89938 Canola mitochondrion, nucleus, plastid, vacuole 0.0 0.0
CDY12156 Canola cytosol 0.0 0.0
CDY50402 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078HSV6UniProt:A0A078HSV6EnsemblPlants:CDY41625ProteinID:CDY41625
ProteinID:CDY41625.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00073279001InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CSInterPro:Glycoside_hydrolase_SF
PFAM:PF00232ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF81SUPFAM:SSF51445SignalP:SignalP-noTM
UniParc:UPI0004EECE8C:::::
Description
BnaC05g43620DBnaC05g43620D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078HSV6]
Coordinates
chrLK032501:+:289287..291063
Molecular Weight (calculated)
27585.8 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.285
Length
242 amino acids
Sequence
(BLAST)
001: MALQKFPLMG LLMLLTIFVS PATADGPVCP PSTKLSRASF PEGFLFGTAT AAYQVEGAVN ETCRGPALWD IYCKRYPEKC KNDNGDVAVD FFHRYKEDIQ
101: LMKNLNTDAF RLSIAWTRIF PHGRKEKGVS QAGVQFYHDV IDELLRNGIV PFVTVFHWDT PQDLEDEYGG FLSERIVKDF REYADFVFQE YGDKVKHWIT
201: FNEPWVFAHA GYDVGKKAPG RCSDYVDRTC KGGRSGYEVY LV
Best Arabidopsis Sequence Match ( AT1G66270.1 )
(BLAST)
001: MALQKFPLMG LLLLLTILVS VTTAVDDPVC PATSKLSRAS FPNGFLFGTA TAAFQVEGAI NETCRGPALW DIYCRRNPER CSGDHADVAV DFFHRYKEDI
101: QLMKNLNTDA FRLSIAWSRI FPHGRKEKGV SQAGVQFYHE LIDELLKNGI VPFVTVFHWD TPQDLEDEYG GFLSQNIVKD FREYADYVFT EYGGKVKNWI
201: TFNEPWVFAH AGYDLGKKAP GRCSRYVPGC EDREGQSGKE AYLVSHNLLN AHAEAVEVFR QKVKGGKIGI AHSPAWFEPH DLKDSNDAPT VSRVLDFMLG
301: WHLEPTTSGD YPQIMKDLLG YRLPQFTAAQ KAKLKDSTDF VGLNYYTSTF SNYNEKPDPS KPSWKQDSLV SWEPKNVDHS AIGSMPLTAA LPVYAKGFRK
401: LLKYIKDKYA NPEIMIMENG YGDKLGTTDS VDVGTADHNR KYYLQRHLLA MNEAICIDKV RVTGYFVWSL LDNFEWQDGY KNRFGLYYVD FKNNLTRYEK
501: ESAKYYKDFL AQGVRPSALK RDEL
Arabidopsis Description
BGLU21BGLU21 [Source:UniProtKB/TrEMBL;Acc:A0A178WA93]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.