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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, vacuole
Any Predictor:cytosol, nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13522 Canola endoplasmic reticulum 81.53 56.18
CDY39071 Canola endoplasmic reticulum 81.53 56.18
CDY21174 Canola cytosol, endoplasmic reticulum, vacuole 36.68 50.92
CDY53522 Canola cytosol 34.04 42.02
CDY45300 Canola cytosol 47.49 39.39
CDY37297 Canola cytosol 47.23 39.17
CDY07912 Canola endoplasmic reticulum 42.74 37.85
CDY12156 Canola cytosol 15.04 34.76
CDY50402 Canola cytosol 15.04 34.76
CDY59555 Canola cytosol 48.02 34.47
CDX73966 Canola endoplasmic reticulum 46.7 33.78
CDY44691 Canola endoplasmic reticulum 46.7 33.78
CDY44692 Canola endoplasmic reticulum 46.44 33.59
CDY40155 Canola endoplasmic reticulum 46.7 33.52
CDY41624 Canola endoplasmic reticulum 46.17 33.4
CDY49904 Canola endoplasmic reticulum 46.17 33.27
CDY62094 Canola endoplasmic reticulum 45.65 33.02
CDY52969 Canola endoplasmic reticulum 45.91 32.95
CDX89938 Canola mitochondrion, nucleus, plastid, vacuole 22.69 31.97
CDY21175 Canola vacuole 41.42 30.13
CDX98706 Canola cytosol 22.43 28.72
CDY29947 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 41.42 28.55
CDY53521 Canola cytoskeleton, endoplasmic reticulum, vacuole 35.88 27.25
CDY47680 Canola endoplasmic reticulum, vacuole 35.09 25.63
CDX71838 Canola cytosol, nucleus, vacuole 34.3 24.12
CDY58095 Canola cytosol, nucleus, vacuole 34.3 24.12
CDY47682 Canola endoplasmic reticulum, vacuole 33.51 23.56
CDX74659 Canola endoplasmic reticulum, vacuole 32.72 23.26
CDY52547 Canola cytosol 25.86 23.17
CDY17847 Canola cytosol, nucleus, vacuole 34.56 23.14
CDY65784 Canola cytosol, nucleus, vacuole 24.54 22.96
CDY71863 Canola cytosol, vacuole 25.33 22.75
CDY47681 Canola mitochondrion 26.12 22.6
CDX79758 Canola mitochondrion 34.56 22.55
CDX76660 Canola endoplasmic reticulum, plastid, vacuole 21.11 22.16
CDY30473 Canola endoplasmic reticulum, vacuole 30.87 21.95
CDY23437 Canola endoplasmic reticulum, vacuole 30.87 21.95
CDY68226 Canola cytosol, vacuole 25.07 21.69
CDX74657 Canola endoplasmic reticulum, vacuole 32.45 20.99
CDX89050 Canola endoplasmic reticulum, vacuole 31.4 20.59
CDY42667 Canola endoplasmic reticulum, vacuole 31.4 20.59
CDY23436 Canola endoplasmic reticulum, vacuole 31.13 20.24
CDY47683 Canola endoplasmic reticulum, vacuole 31.4 20.24
Bra021292.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.44 20.23
CDX74658 Canola cytosol, endoplasmic reticulum, vacuole 31.13 19.83
CDY15268 Canola endoplasmic reticulum, vacuole 26.12 19.57
Os12t0420100-01 Rice endoplasmic reticulum, vacuole 25.33 19.51
CDY03953 Canola endoplasmic reticulum, vacuole 11.87 19.48
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 25.59 19.21
CDY47163 Canola endoplasmic reticulum, vacuole 25.59 18.8
CDY55219 Canola endoplasmic reticulum, vacuole 25.33 18.57
CDX77376 Canola endoplasmic reticulum, vacuole 22.96 18.47
CDX93043 Canola endoplasmic reticulum, vacuole 23.48 18.39
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 25.07 18.3
CDX76387 Canola vacuole 22.43 18.2
CDX79092 Canola cytosol, nucleus, vacuole 22.43 18.09
CDX89146 Canola endoplasmic reticulum, extracellular, vacuole 23.75 18.07
CDX93964 Canola endoplasmic reticulum, extracellular, vacuole 23.75 18.07
CDX83559 Canola endoplasmic reticulum, vacuole 24.01 17.84
CDY12153 Canola endoplasmic reticulum, vacuole 26.91 17.83
CDY15703 Canola endoplasmic reticulum, vacuole 22.69 17.81
CDY11445 Canola endoplasmic reticulum, extracellular, vacuole 23.75 17.79
CDX94056 Canola vacuole 24.8 17.77
CDY19167 Canola endoplasmic reticulum, vacuole 27.97 17.73
CDY23784 Canola endoplasmic reticulum, vacuole 27.97 17.73
CDY11446 Canola endoplasmic reticulum, vacuole 23.48 17.62
CDY55533 Canola cytosol 23.75 17.41
CDX76659 Canola endoplasmic reticulum, plasma membrane, vacuole 22.96 17.33
CDY25325 Canola endoplasmic reticulum, vacuole 21.9 17.33
CDY30474 Canola cytosol 36.41 17.23
CDY44014 Canola endoplasmic reticulum, vacuole 22.96 17.13
CDX77373 Canola cytosol, endoplasmic reticulum, vacuole 24.8 16.82
CDY23438 Canola endoplasmic reticulum, vacuole 36.15 16.79
Solyc01g081170.1.1 Tomato cytosol, peroxisome, vacuole 18.47 16.67
CDX95732 Canola plastid 23.48 16.24
CDY69599 Canola cytosol, mitochondrion, vacuole 14.78 16.0
CDY07263 Canola endoplasmic reticulum, vacuole 21.11 15.78
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 25.33 13.89
CDY23576 Canola endoplasmic reticulum, vacuole 12.66 12.6
CDY27473 Canola nucleus 23.22 11.31
CDX74660 Canola endoplasmic reticulum, vacuole 35.09 10.52
CDX83321 Canola endoplasmic reticulum, golgi, plasma membrane 16.36 10.18
CDY41625 Canola endoplasmic reticulum, extracellular, vacuole 5.54 8.68
HORVU7Hr1G091730.2 Barley plastid 11.35 8.41
CDY00802 Canola endoplasmic reticulum, vacuole 6.07 7.8
CDY15109 Canola endoplasmic reticulum, vacuole 2.37 3.53
Protein Annotations
MapMan:19.2.2.8.1.1Gene3D:3.20.20.80Gene3D:3.30.710.10GO:A0A078HMG3UniProt:A0A078HMG3EnsemblPlants:CDY39072
ProteinID:CDY39072ProteinID:CDY39072.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0006511GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00067221001InterPro:Glyco_hydro_1InterPro:Glycoside_hydrolase_SFPFAM:PF00232PFAM:PF03931
PRINTS:PR00131PANTHER:PTHR10353PANTHER:PTHR10353:SF81InterPro:SKP1-likeInterPro:SKP1/BTB/POZ_sfSMART:SM00512
SUPFAM:SSF51445SUPFAM:SSF54695InterPro:Skp1_comp_POZUniParc:UPI0004EF42B5SEG:seg:
Description
BnaA02g17610DBnaA02g17610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMG3]
Coordinates
chrLK032439:+:313127..315290
Molecular Weight (calculated)
43618.7 Da
IEP (calculated)
4.778
GRAVY (calculated)
-0.657
Length
379 amino acids
Sequence
(BLAST)
001: MSTKKIVLKS SDGESFEVDE AVALESQTIA HMVEDDCVDN GIPLPNVTSK ILAKVIEYCK KHVDAGKQHR DVALSTSKSM GTCVTMDDQD MKLISLCKAG
101: KIGIAHTPAW FDQNELTDEP HKLSEEEHAT PATNLIDFVL GWHLNPTTYG DYPQSMKDHV GDRLPEFTEA QKNKLKNSAD FVGINYYYSL FALHGEEQDP
201: SKPSWQSDSL IDYEPRYVDR FNAFTIKPDV AKVDVYSNGL RRLLNYIKDK YGNPEVIITG NGYGEDLGEQ DRSLVLALSD HHRTYYIQKH LLSLHQAICE
301: DKVNVTGYFL WSLMDNFEWQ EGYSARFGLY YVDYKNNLTR HEKLSAQWYS SFLQDGKEFE FDQHDEYHEH DEYHEHDEL
Best Arabidopsis Sequence Match ( AT1G52400.1 )
(BLAST)
001: MVRFEKVHLV LGLALVLTLV GAPTKAQGPV CGAGLPDKFS RLNFPEGFIW GTATAAFQVE GAVNEGCRGP SMWDTFTKKF PHRCENHNAD VAVDFYHRYK
101: EDIQLMKDLN TDAFRLSIAW PRIFPHGRMS KGISKVGVQF YHDLIDELLK NNIIPLVTVF HWDTPQDLED EYGGFLSGRI VQDFTEYANF TFHEYGHKVK
201: HWITFNEPWV FSRAGYDNGK KAPGRCSPYI PGYGQHCQDG RSGYEAYQVS HNLLLSHAYA VDAFRNCKQC AGGKIGIAHS PAWFEPQDLE HVGGSIERVL
301: DFILGWHLAP TTYGDYPQSM KDRVGHRLPK FTEAEKKLLK GSTDYVGMNY YTSVFAKEIS PDPKSPSWTT DSLVDWDSKS VDGYKIGSKP FNGKLDVYSK
401: GLRYLLKYIK DNYGDPEVII AENGYGEDLG EKHNDVNFGT QDHNRKYYIQ RHLLSMHDAI CKDKVNVTGY FVWSLMDNFE WQDGYKARFG LYYIDFQNNL
501: TRHQKVSGKW YSEFLKPQFP TSKLREEL
Arabidopsis Description
BGLU18Beta-D-glucopyranosyl abscisate beta-glucosidase [Source:UniProtKB/Swiss-Prot;Acc:Q9SE50]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.