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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55533 Canola cytosol 53.86 81.04
CDY71863 Canola cytosol, vacuole 38.82 71.56
CDY65784 Canola cytosol, nucleus, vacuole 36.76 70.62
CDX95732 Canola plastid 48.33 68.61
CDX76387 Canola vacuole 39.46 65.74
CDX83559 Canola endoplasmic reticulum, vacuole 41.52 63.33
CDX76660 Canola endoplasmic reticulum, plastid, vacuole 27.12 58.45
TraesCS3D01G181500.1 Wheat cytosol, mitochondrion, vacuole 14.65 57.29
CDY11446 Canola endoplasmic reticulum, vacuole 35.86 55.25
CDY11445 Canola endoplasmic reticulum, extracellular, vacuole 35.86 55.14
CDX76659 Canola endoplasmic reticulum, plasma membrane, vacuole 35.48 54.98
CDY44014 Canola endoplasmic reticulum, vacuole 35.86 54.92
CDX89146 Canola endoplasmic reticulum, extracellular, vacuole 34.96 54.62
CDX93964 Canola endoplasmic reticulum, extracellular, vacuole 34.45 53.82
CDY23576 Canola endoplasmic reticulum, vacuole 25.71 52.49
CDX77376 Canola endoplasmic reticulum, vacuole 31.23 51.59
CDX83321 Canola endoplasmic reticulum, golgi, plasma membrane 40.1 51.23
CDY15703 Canola endoplasmic reticulum, vacuole 30.72 49.48
CDX93043 Canola endoplasmic reticulum, vacuole 30.72 49.38
CDY00802 Canola endoplasmic reticulum, vacuole 18.51 48.81
CDX89938 Canola mitochondrion, nucleus, plastid, vacuole 16.84 48.7
KRH71571 Soybean cytosol 30.59 48.47
Os01t0813800-02 Rice cytosol 14.27 47.84
CDY15268 Canola endoplasmic reticulum, vacuole 30.85 47.43
VIT_07s0005g00360.t01 Wine grape endoplasmic reticulum, vacuole 30.21 46.35
KRH17296 Soybean endoplasmic reticulum, vacuole 30.21 45.99
KRH69300 Soybean endoplasmic reticulum 30.72 45.87
Solyc09g075060.2.1 Tomato vacuole 29.69 45.83
GSMUA_Achr11P... Banana cytosol, vacuole 10.15 45.14
PGSC0003DMT400029652 Potato vacuole 28.28 44.72
Solyc09g075070.2.1 Tomato endoplasmic reticulum 29.82 44.53
HORVU3Hr1G035590.1 Barley cytosol, vacuole 27.38 43.92
KRH49402 Soybean endoplasmic reticulum, vacuole 28.79 43.75
CDY03953 Canola endoplasmic reticulum, vacuole 12.98 43.72
CDX77373 Canola cytosol, endoplasmic reticulum, vacuole 31.36 43.65
KRH07600 Soybean endoplasmic reticulum 28.92 43.52
TraesCS3A01G175800.1 Wheat vacuole 27.76 43.2
KRH71570 Soybean endoplasmic reticulum, vacuole 25.96 42.89
KRH49404 Soybean endoplasmic reticulum 28.92 42.86
TraesCS3B01G205500.1 Wheat endoplasmic reticulum, vacuole 27.64 42.57
Os01t0813700-01 Rice endoplasmic reticulum, vacuole 26.99 42.0
TraesCS3D01G181400.1 Wheat endoplasmic reticulum, vacuole 27.38 41.85
Os05t0366600-01 Rice extracellular 28.41 41.46
VIT_07s0005g00370.t01 Wine grape cytosol 10.41 41.33
GSMUA_Achr9P16470_001 Banana endoplasmic reticulum, vacuole 27.25 41.25
Os05t0366000-00 Rice vacuole 27.25 41.25
KXG21836 Sorghum endoplasmic reticulum, vacuole 27.76 41.14
GSMUA_Achr5P21420_001 Banana endoplasmic reticulum, vacuole 27.51 40.92
EES18092 Sorghum endoplasmic reticulum, vacuole 26.74 40.86
GSMUA_Achr9P16420_001 Banana vacuole 26.99 40.78
CDY15109 Canola endoplasmic reticulum, vacuole 13.24 40.39
Zm00001d043110_P012 Maize vacuole 26.22 40.16
Os01t0930800-01 Rice endoplasmic reticulum, vacuole 26.48 40.16
OQU87739 Sorghum vacuole 24.68 39.92
Zm00001d037918_P001 Maize endoplasmic reticulum, mitochondrion, vacuole 27.25 39.85
Os05t0365600-01 Rice cytosol, endoplasmic reticulum, vacuole 26.86 39.58
CDY69599 Canola cytosol, mitochondrion, vacuole 17.22 38.29
Os05t0366800-00 Rice endoplasmic reticulum, plastid, vacuole 21.59 37.84
PGSC0003DMT400029658 Potato endoplasmic reticulum, plasma membrane, vacuole 9.64 34.4
CDY68226 Canola cytosol, vacuole 19.15 34.02
CDY37297 Canola cytosol 19.54 33.26
CDY45300 Canola cytosol 19.54 33.26
CDX74659 Canola endoplasmic reticulum, vacuole 22.75 33.21
CDY47682 Canola endoplasmic reticulum, vacuole 22.88 33.02
CDY30473 Canola endoplasmic reticulum, vacuole 22.62 33.02
CDX79092 Canola cytosol, nucleus, vacuole 19.92 32.98
CDY23437 Canola endoplasmic reticulum, vacuole 22.49 32.83
CDY41625 Canola endoplasmic reticulum, extracellular, vacuole 10.15 32.64
CDX89050 Canola endoplasmic reticulum, vacuole 24.04 32.35
CDY42667 Canola endoplasmic reticulum, vacuole 23.91 32.18
CDX98706 Canola cytosol 12.21 32.09
CDX74657 Canola endoplasmic reticulum, vacuole 24.16 32.08
CDY23436 Canola endoplasmic reticulum, vacuole 23.78 31.73
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 20.57 31.68
CDY47163 Canola endoplasmic reticulum, vacuole 20.95 31.59
CDY47680 Canola endoplasmic reticulum, vacuole 20.95 31.41
CDY55219 Canola endoplasmic reticulum, vacuole 20.82 31.33
CDX73966 Canola endoplasmic reticulum 21.08 31.3
CDY41624 Canola endoplasmic reticulum 21.08 31.3
CDY52547 Canola cytosol 16.97 31.21
CDY44691 Canola endoplasmic reticulum 20.95 31.11
CDY44692 Canola endoplasmic reticulum 20.95 31.11
CDY62094 Canola endoplasmic reticulum 20.95 31.11
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 20.69 31.02
CDY49904 Canola endoplasmic reticulum 20.95 30.99
CDY40155 Canola endoplasmic reticulum 20.95 30.87
CDY21175 Canola vacuole 20.57 30.71
CDY52969 Canola endoplasmic reticulum 20.69 30.49
CDY25325 Canola endoplasmic reticulum, vacuole 18.77 30.48
CDY53522 Canola cytosol 11.95 30.29
CDY47683 Canola endoplasmic reticulum, vacuole 22.88 30.27
CDX74658 Canola cytosol, endoplasmic reticulum, vacuole 23.01 30.08
CDY59555 Canola cytosol 20.31 29.92
CDX71838 Canola cytosol, nucleus, vacuole 20.44 29.5
CDY58095 Canola cytosol, nucleus, vacuole 20.44 29.5
CDY29947 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 20.82 29.45
CDY47681 Canola mitochondrion 16.58 29.45
CDY13522 Canola endoplasmic reticulum 20.69 29.27
CDY39071 Canola endoplasmic reticulum 20.69 29.27
CDX94056 Canola vacuole 19.79 29.11
VIT_07s0005g00390.t01 Wine grape cytosol, plasma membrane, vacuole 31.36 29.05
CDY21174 Canola cytosol, endoplasmic reticulum, vacuole 10.15 28.94
CDY07912 Canola endoplasmic reticulum 15.68 28.5
CDY17847 Canola cytosol, nucleus, vacuole 20.44 28.09
CDY12156 Canola cytosol 5.91 28.05
CDY50402 Canola cytosol 5.91 28.05
CDY07263 Canola endoplasmic reticulum, vacuole 17.87 27.42
CDX79758 Canola mitochondrion 20.44 27.37
GSMUA_Achr11P... Banana plastid 27.51 27.05
CDY53521 Canola cytoskeleton, endoplasmic reticulum, vacuole 17.35 27.05
CDY19167 Canola endoplasmic reticulum, vacuole 20.05 26.09
CDY23784 Canola endoplasmic reticulum, vacuole 20.05 26.09
CDY12153 Canola endoplasmic reticulum, vacuole 18.51 25.17
VIT_07s0005g00410.t01 Wine grape endoplasmic reticulum, vacuole 31.49 24.04
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 20.69 23.3
CDY39072 Canola cytosol, endoplasmic reticulum, vacuole 11.31 23.22
CDY30474 Canola cytosol 22.11 21.47
CDY23438 Canola endoplasmic reticulum, vacuole 21.85 20.83
CDX74660 Canola endoplasmic reticulum, vacuole 20.31 12.5
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078GS87UniProt:A0A078GS87EnsemblPlants:CDY27473ProteinID:CDY27473
ProteinID:CDY27473.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00038123001InterPro:Glyco_hydro_1InterPro:Glycoside_hydrolase_SF
PFAM:PF00232PRINTS:PR00131PANTHER:PTHR10353PANTHER:PTHR10353:SF29SUPFAM:SSF51445UniParc:UPI0004EE3C03
SEG:seg:::::
Description
BnaC04g51140DBnaC04g51140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS87]
Coordinates
chrLK032205:+:66698..73387
Molecular Weight (calculated)
87396.1 Da
IEP (calculated)
8.839
GRAVY (calculated)
-0.680
Length
778 amino acids
Sequence
(BLAST)
001: MENGDKACDG YHKYKEDVQL MVETGLEAFR FSISWSRLTP NGRGSVNPKG LQFYKNFILE LVSHGIEPHV TLYHYDHPQQ LEDEYGGWLN RRIIKDFTAY
101: ADVCFREFGN HVKFWTTINE ANIFTVGGYD GGNTPHGRCS TCLSGNSSTE PYIVAHNLLL DHASASRLYR QKYKDTQGGS VGFSIFAIGF RPSTNSKDDE
201: MAIQRFKDFF FGWMLGPLTY GDYPEGMKRI LGTRLPVFTK KESEQVKGSS DFVGVIHYLA ASISNAQSQP SLPGNSAFFT DIGASLTYSG NFSAFEYEVA
301: PWAMEVVLEY IKQSYGNPPV YILENGKPMK QDLQLQKKDT PRIEFLDAYI GAVLKAVRNG SDTRGYFVWS FMDLYELLSG YKFSFGLYSV NFSDPHRNRS
401: PKLTAHWYSA FLKGNTTFLG SQGITQCAML KLETHSGPRN VESDHARIVE VVPHVDADLK HTAAKVVEKA KGICESKSED DLHHRELSNH HYSRKEEGRD
501: LSRTSHRSEP QEKRGRSASG REESISGPVP RNPTARGIPL QSDKVPATQT IFDEAVEEVR EAMIQYTQCA DPTESAARRE RLRLAEEKGE LEEAASLMIQ
601: ARLETENGTL TGNPREEEEL PLTERIPATL RLGPMAPLSL YDEEGPSAER IPAALRLGPV EIPQNRTAMQ ITTTKEKRKP GRPPAKKRTI TSPQGTKASS
701: SRKRKIQQAK PPPARRRLLA EPEKGQTSRA RADKPRSSRK TTRTTTSSAN SDDQPICNMI PRATRRKMDF QDPSHLVP
Best Arabidopsis Sequence Match ( AT4G22100.1 )
(BLAST)
001: MELTLSLLTI FLLFFALSGR CSDKNDFPEG FIFGSATSAY QWEGAFDEDG RKPSVWDTFL HTRNLSNGDI TSDGYHKYKE DVKLMVETGL DAFRFSISWS
101: RLIPNGRGPV NPKGLQFYKN FIQELVSHGI EPHVTLFHYD HPQYLEDEYG GWINRRIIQD FTAYANVCFR EFGHHVKFWT TINEANIFTI GGYNDGITPP
201: GRCSSPGRNC SSGNSSTEPY IVGHNLLLAH ASASRLYKQK YKDMQGGSVG FSLFSLGFTP STSSKDDDIA VQRAKDFYFG WMLEPFIFGD YPDEMKRTVG
301: SRLPVFSKEE SEQVKGSSDF IGIIHYLAAS VTSIKIKPSI SGNPDFYSDM GVSMTWTVLG NFSAFEYAVA PWAMESVLEY IKQSYGNPPI YILENGTPMK
401: QDLQLQQKDT PRIEYLHAYI AAVLKSIRNG SDTRGYFIWS FMDLYELVKG YEFSFGLYSV NFSDPHRTRS PKLSAHWYSA FLKGNTTFLG SQGIMQMQSN
501: FSSSASS
Arabidopsis Description
BGLU3Beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:O65458]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.