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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:peroxisome, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008230.1-P Field mustard endoplasmic reticulum 100.0 100.0
CDY39071 Canola endoplasmic reticulum 100.0 100.0
AT1G75940.1 Thale cress endoplasmic reticulum 83.45 85.79
CDY39072 Canola cytosol, endoplasmic reticulum, vacuole 56.18 81.53
CDY40155 Canola endoplasmic reticulum 66.18 68.94
CDY59555 Canola cytosol 66.18 68.94
CDY49904 Canola endoplasmic reticulum 65.64 68.63
CDY52969 Canola endoplasmic reticulum 65.45 68.18
CDY41625 Canola endoplasmic reticulum, extracellular, vacuole 29.82 67.77
CDY45300 Canola cytosol 55.27 66.52
CDY37297 Canola cytosol 55.09 66.3
CDY62094 Canola endoplasmic reticulum 62.36 65.46
CDX73966 Canola endoplasmic reticulum 62.0 65.08
CDY53522 Canola cytosol 36.18 64.82
CDY53521 Canola cytoskeleton, endoplasmic reticulum, vacuole 57.64 63.53
CDY44692 Canola endoplasmic reticulum 60.36 63.36
CDY41624 Canola endoplasmic reticulum 60.18 63.17
CDY44691 Canola endoplasmic reticulum 60.18 63.17
CDY07912 Canola endoplasmic reticulum 49.09 63.08
CDY21175 Canola vacuole 52.0 54.89
CDY29947 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 52.36 52.36
CDY21174 Canola cytosol, endoplasmic reticulum, vacuole 25.82 52.01
CDY47681 Canola mitochondrion 41.27 51.83
CDY47680 Canola endoplasmic reticulum, vacuole 47.27 50.1
CDY69599 Canola cytosol, mitochondrion, vacuole 30.0 47.14
VIT_13s0064g00520.t01 Wine grape endoplasmic reticulum, vacuole 26.91 46.54
CDX71838 Canola cytosol, nucleus, vacuole 45.45 46.38
CDY58095 Canola cytosol, nucleus, vacuole 45.45 46.38
CDY47682 Canola endoplasmic reticulum, vacuole 44.36 45.27
CDX74659 Canola endoplasmic reticulum, vacuole 43.82 45.22
CDY30473 Canola endoplasmic reticulum, vacuole 43.09 44.47
CDY17847 Canola cytosol, nucleus, vacuole 45.64 44.35
CDY23437 Canola endoplasmic reticulum, vacuole 42.91 44.28
CDX79758 Canola mitochondrion 46.0 43.55
KRH29659 Soybean endoplasmic reticulum, plasma membrane, vacuole 41.27 43.32
Os08t0509400-01 Rice endoplasmic reticulum, vacuole 38.55 42.4
CDY00802 Canola endoplasmic reticulum, vacuole 22.55 42.03
CDX89050 Canola endoplasmic reticulum, vacuole 42.91 40.83
CDY47683 Canola endoplasmic reticulum, vacuole 43.64 40.82
CDY42667 Canola endoplasmic reticulum, vacuole 42.73 40.66
CDX74658 Canola cytosol, endoplasmic reticulum, vacuole 43.45 40.17
CDX74657 Canola endoplasmic reticulum, vacuole 42.55 39.93
CDX77376 Canola endoplasmic reticulum, vacuole 34.0 39.7
CDY15268 Canola endoplasmic reticulum, vacuole 36.18 39.33
CDY23436 Canola endoplasmic reticulum, vacuole 41.64 39.28
KXG23299 Sorghum plastid 35.45 38.92
CDY23576 Canola endoplasmic reticulum, vacuole 26.55 38.32
CDY52547 Canola cytosol 29.45 38.3
Zm00001d041168_P001 Maize plastid 35.82 38.25
TraesCS2B01G600100.1 Wheat cytosol, mitochondrion, vacuole 29.27 37.88
CDX93964 Canola endoplasmic reticulum, extracellular, vacuole 34.18 37.75
CDY15109 Canola endoplasmic reticulum, vacuole 17.45 37.65
CDX89146 Canola endoplasmic reticulum, extracellular, vacuole 34.0 37.55
CDY71863 Canola cytosol, vacuole 28.73 37.44
TraesCS2B01G600000.1 Wheat cytosol, plastid, vacuole 28.91 37.41
CDX93043 Canola endoplasmic reticulum, vacuole 32.91 37.4
EES15867 Sorghum plastid 38.36 37.35
CDX76387 Canola vacuole 31.45 37.05
OQU78971 Sorghum plastid 37.64 36.96
CDY15703 Canola endoplasmic reticulum, vacuole 32.36 36.85
Zm00001d024891_P001 Maize plastid 37.09 36.82
Zm00001d041776_P001 Maize extracellular 37.82 36.68
CDY11446 Canola endoplasmic reticulum, vacuole 33.64 36.63
CDY11445 Canola endoplasmic reticulum, extracellular, vacuole 33.64 36.56
CDY55533 Canola cytosol 34.36 36.56
CDX76659 Canola endoplasmic reticulum, plasma membrane, vacuole 33.27 36.45
Zm00001d041777_P001 Maize plastid 37.45 36.14
TraesCS5B01G418000.1 Wheat plastid 36.91 36.12
CDY19167 Canola endoplasmic reticulum, vacuole 39.27 36.12
KRH29658 Soybean endoplasmic reticulum, plasma membrane, vacuole 20.73 36.08
Zm00001d041173_P001 Maize plasma membrane 36.36 35.97
Zm00001d024037_P005 Maize plastid 36.73 35.88
CDY44014 Canola endoplasmic reticulum, vacuole 33.09 35.83
CDY23784 Canola endoplasmic reticulum, vacuole 38.91 35.79
KRH43441 Soybean endoplasmic reticulum, extracellular, vacuole 28.55 35.76
CDY12153 Canola endoplasmic reticulum, vacuole 36.91 35.49
EES16911 Sorghum cytosol 20.0 35.48
CDY25325 Canola endoplasmic reticulum, vacuole 30.55 35.07
CDY65784 Canola cytosol, nucleus, vacuole 25.82 35.06
CDX83559 Canola endoplasmic reticulum, vacuole 32.36 34.9
CDY55219 Canola endoplasmic reticulum, vacuole 32.73 34.82
Zm00001d023994_P002 Maize plastid 35.82 34.81
CDY12156 Canola cytosol 10.36 34.76
CDY50402 Canola cytosol 10.36 34.76
CDY47163 Canola endoplasmic reticulum, vacuole 32.55 34.69
TraesCSU01G036600.1 Wheat plastid 35.45 34.57
Zm00001d024000_P002 Maize plastid 35.82 34.44
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 31.45 34.26
TraesCS2B01G600200.1 Wheat plastid 35.64 34.21
CDX89938 Canola mitochondrion, nucleus, plastid, vacuole 16.73 34.2
TraesCS2B01G599800.1 Wheat extracellular 35.27 34.09
CDX79092 Canola cytosol, nucleus, vacuole 28.91 33.83
CDY68226 Canola cytosol, vacuole 26.91 33.79
CDX95732 Canola plastid 33.64 33.76
TraesCS2B01G599900.3 Wheat plastid 34.91 33.74
TraesCS2D01G594400.1 Wheat extracellular, plasma membrane 34.73 33.51
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 31.45 33.33
CDX77373 Canola cytosol, endoplasmic reticulum, vacuole 32.91 32.38
CDX76660 Canola endoplasmic reticulum, plastid, vacuole 21.09 32.13
KRH25456 Soybean endoplasmic reticulum, mitochondrion, vacuole 27.27 32.12
CDY23438 Canola endoplasmic reticulum, vacuole 46.91 31.62
CDY03953 Canola endoplasmic reticulum, vacuole 13.27 31.6
CDX98706 Canola cytosol 16.91 31.42
CDY07263 Canola endoplasmic reticulum, vacuole 28.73 31.16
CDX94056 Canola vacuole 29.82 31.0
CDY30474 Canola cytosol 44.73 30.71
CDX83321 Canola endoplasmic reticulum, golgi, plasma membrane 28.73 25.94
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 32.36 25.76
CDY27473 Canola nucleus 29.27 20.69
CDX74660 Canola endoplasmic reticulum, vacuole 47.27 20.57
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078HNC1UniProt:A0A078HNC1EnsemblPlants:CDY13522ProteinID:CDY13522
ProteinID:CDY13522.1ProteinID:CDY39071.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00077843001InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CS
InterPro:Glycoside_hydrolase_SFPFAM:PF00232PRINTS:PR00131ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF81
SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002545D3FSEG:seg:
Description
BnaC02g23330DBnaA02g17600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNC1]
Coordinates
chrLK032036:-:5388..8659
Molecular Weight (calculated)
63922.5 Da
IEP (calculated)
5.943
GRAVY (calculated)
-0.623
Length
550 amino acids
Sequence
(BLAST)
001: MERFHKFPLL GLVLFLGFIG SPTKAIVHAC SSTELTFSRA NFPEGFIFGT STAAFQVEGA VHEGCRGPSM WDTYTKKFPH RNNYHKADVA VDFYHRYKED
101: IKLMKDLNTD GFRFSIAWPR IFPHGRMEKG ISKAGVQFYH DLIDELLKNE ITPLVTVFHW DTPQDLEDEY GGFLSDRIIK DYTEYANFTF QEYGHKVKHW
201: ITFNEPWVFS RAGYDIGKTA PGRCSKYIKE HGDLCHDGRS GHEAYIVSHN MLLAHADAVE AFRKCDKCKA GKIGIAHTPA WFDQNELTDE PHKLSEEEHA
301: TPATNLIDFV LGWHLNPTTY GDYPQSMKDH VGDRLPEFTE AQKNKLKNSA DFVGINYYYS LFALHGEEQD PSKPSWQSDS LIDYEPRYVD RFNAFTIKPD
401: VAKVDVYSNG LRRLLNYIKD KYGNPEVIIT GNGYGEDLGE QDRSLVLALS DHHRTYYIQK HLLSLHQAIC EDKVNVTGYF LWSLMDNFEW QEGYSARFGL
501: YYVDYKNNLT RHEKLSAQWY SSFLQDGKEF EFDQHDEYHE HDEYHEHDEL
Best Arabidopsis Sequence Match ( AT1G75940.1 )
(BLAST)
001: MGRFHKFPLL GLVLFLGLTG SLIAANEYAC SSTDIHFTRA NFPKGFIFGT ATAAFQVEGA VNEGCRGPSM WDVYTKKFPH KCNYHNADVA VDFYHRYKED
101: IKLMKNLNTD GFRFSIAWPR IFPHGRMEKG ISKAGVQYYH DLIDELLANG ITPLVTVFHW DTPQDLEDEY GGFLSDRIIK DFTEYANFTF QEYGDKVKHW
201: ITFNEPWVFS RAGYDIGNKA PGRCSKYIKE HGEMCHDGRS GHEAYIVSHN MLLAHADAVD AFRKCDKCKG GKIGIAHSPA WFEAHELSDE EHETPVTGLI
301: DFILGWHLHP TTYGDYPQSM KDHIGHRLPK FTEAQKEKLK NSADFVGINY YTSVFALHDE EPDPSQPSWQ SDSLVDWEPR YVDKFNAFAN KPDVAKVEVY
401: AKGLRSLLKY IKDKYGNPEI MITENGYGED LGEQDTSLVV ALSDQHRTYY IQKHLLSLHE AICDDKVNVT GYFHWSLMDN FEWQDGYKAR FGLYYVDYKN
501: NLTRHEKLSA QWYSSFLHDG SKEFEIEHEF EHDEL
Arabidopsis Description
BGLU20Beta-glucosidase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.