Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 8
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39071 | Canola | endoplasmic reticulum | 85.79 | 83.45 |
| CDY13522 | Canola | endoplasmic reticulum | 85.79 | 83.45 |
| Bra008230.1-P | Field mustard | endoplasmic reticulum | 85.79 | 83.45 |
| AT1G52400.1 | Thale cress | endoplasmic reticulum | 69.53 | 70.45 |
| AT3G21370.1 | Thale cress | endoplasmic reticulum | 68.97 | 70.02 |
| AT3G09260.1 | Thale cress | endoplasmic reticulum | 65.79 | 67.18 |
| AT1G66280.1 | Thale cress | endoplasmic reticulum | 64.86 | 66.22 |
| AT1G66270.1 | Thale cress | endoplasmic reticulum | 64.49 | 65.84 |
| AT5G28510.1 | Thale cress | endoplasmic reticulum | 62.62 | 62.85 |
| AT3G03640.1 | Thale cress | vacuole | 54.21 | 54.61 |
| AT5G24550.1 | Thale cress | endoplasmic reticulum, vacuole | 47.66 | 47.75 |
| AT5G24540.1 | Thale cress | endoplasmic reticulum, vacuole | 47.48 | 47.57 |
| VIT_13s0064g00520.t01 | Wine grape | endoplasmic reticulum, vacuole | 28.22 | 47.48 |
| AT2G44490.1 | Thale cress | plastid | 49.35 | 47.14 |
| AT3G60120.1 | Thale cress | cytosol | 46.54 | 46.11 |
| KRH29659 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 43.55 | 44.47 |
| Os08t0509400-01 | Rice | endoplasmic reticulum, vacuole | 40.75 | 43.6 |
| AT2G44460.1 | Thale cress | endoplasmic reticulum, vacuole | 45.61 | 41.92 |
| AT3G60140.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.67 | 41.42 |
| AT2G44470.3 | Thale cress | endoplasmic reticulum, vacuole | 44.49 | 40.34 |
| Zm00001d041168_P001 | Maize | plastid | 38.5 | 40.0 |
| KXG23299 | Sorghum | plastid | 37.2 | 39.72 |
| AT1G60270.1 | Thale cress | endoplasmic reticulum, vacuole | 28.04 | 39.58 |
| AT2G32860.2 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.86 | 39.09 |
| EES15867 | Sorghum | plastid | 40.93 | 38.76 |
| AT4G22100.1 | Thale cress | endoplasmic reticulum, vacuole | 36.64 | 38.66 |
| TraesCS2B01G600100.1 | Wheat | cytosol, mitochondrion, vacuole | 30.65 | 38.59 |
| TraesCS2B01G600000.1 | Wheat | cytosol, plastid, vacuole | 30.65 | 38.59 |
| OQU78971 | Sorghum | plastid | 40.37 | 38.57 |
| AT4G27830.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 36.26 | 38.19 |
| Zm00001d041173_P001 | Maize | plasma membrane | 39.25 | 37.77 |
| Zm00001d024891_P001 | Maize | plastid | 39.07 | 37.73 |
| AT1G60090.1 | Thale cress | endoplasmic reticulum, vacuole | 36.07 | 37.7 |
| KRH29658 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 22.24 | 37.66 |
| Zm00001d024037_P005 | Maize | plastid | 39.63 | 37.66 |
| AT1G02850.4 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 36.64 | 37.62 |
| Zm00001d041776_P001 | Maize | extracellular | 39.81 | 37.57 |
| AT4G27820.1 | Thale cress | vacuole | 35.33 | 37.35 |
| KRH43441 | Soybean | endoplasmic reticulum, extracellular, vacuole | 30.47 | 37.13 |
| Zm00001d041777_P001 | Maize | plastid | 39.44 | 37.02 |
| TraesCS5B01G418000.1 | Wheat | plastid | 38.32 | 36.48 |
| AT1G61820.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 35.14 | 36.43 |
| AT1G45191.1 | Thale cress | endoplasmic reticulum, vacuole | 35.89 | 36.29 |
| Zm00001d023994_P002 | Maize | plastid | 38.32 | 36.22 |
| Zm00001d024000_P002 | Maize | plastid | 38.69 | 36.19 |
| AT3G62750.2 | Thale cress | cytosol, endoplasmic reticulum, vacuole | 35.33 | 36.14 |
| EES16911 | Sorghum | cytosol | 20.37 | 35.16 |
| TraesCSU01G036600.1 | Wheat | plastid | 37.01 | 35.11 |
| TraesCS2B01G600200.1 | Wheat | plastid | 37.38 | 34.9 |
| AT3G62740.1 | Thale cress | endoplasmic reticulum, vacuole | 32.34 | 34.46 |
| TraesCS2B01G599800.1 | Wheat | extracellular | 36.64 | 34.45 |
| AT1G61810.3 | Thale cress | endoplasmic reticulum, vacuole | 34.77 | 34.25 |
| TraesCS2D01G594400.1 | Wheat | extracellular, plasma membrane | 36.45 | 34.21 |
| TraesCS2B01G599900.3 | Wheat | plastid | 36.26 | 34.09 |
| AT4G21760.2 | Thale cress | cytosol, vacuole | 33.46 | 32.84 |
| KRH25456 | Soybean | endoplasmic reticulum, mitochondrion, vacuole | 28.6 | 32.76 |
| HORVU7Hr1G091730.2 | Barley | plastid | 22.62 | 23.68 |
| Solyc01g081170.1.1 | Tomato | cytosol, peroxisome, vacuole | 15.14 | 19.29 |
Protein Annotations
| Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:843927 | ProteinID:AAF26759.2 | ProteinID:AEE35779.1 | EMBL:AF037590 |
| ArrayExpress:AT1G75940 | EnsemblPlantsGene:AT1G75940 | RefSeq:AT1G75940 | TAIR:AT1G75940 | RefSeq:AT1G75940-TAIR-G | EnsemblPlants:AT1G75940.1 |
| TAIR:AT1G75940.1 | Symbol:ATA27 | EMBL:AY074517 | Unigene:At.10790 | EMBL:BT002735 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005788 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008422 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0102483 | GO:GO:1901657 |
| InterPro:Glyco_hydro_1 | InterPro:Glyco_hydro_1_N_CS | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_177722.1 | PFAM:PF00232 | PO:PO:0000013 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0025022 | PO:PO:0025277 | PRINTS:PR00131 | ScanProsite:PS00653 | PANTHER:PTHR10353 | PANTHER:PTHR10353:SF81 |
| UniProt:Q84WV2 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000000BD92 | SEG:seg |
Description
BGLU20Beta-glucosidase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV2]
Coordinates
chr1:+:28511142..28514284
Molecular Weight (calculated)
61678.2 Da
IEP (calculated)
6.038
GRAVY (calculated)
-0.534
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRFHKFPLL GLVLFLGLTG SLIAANEYAC SSTDIHFTRA NFPKGFIFGT ATAAFQVEGA VNEGCRGPSM WDVYTKKFPH KCNYHNADVA VDFYHRYKED
101: IKLMKNLNTD GFRFSIAWPR IFPHGRMEKG ISKAGVQYYH DLIDELLANG ITPLVTVFHW DTPQDLEDEY GGFLSDRIIK DFTEYANFTF QEYGDKVKHW
201: ITFNEPWVFS RAGYDIGNKA PGRCSKYIKE HGEMCHDGRS GHEAYIVSHN MLLAHADAVD AFRKCDKCKG GKIGIAHSPA WFEAHELSDE EHETPVTGLI
301: DFILGWHLHP TTYGDYPQSM KDHIGHRLPK FTEAQKEKLK NSADFVGINY YTSVFALHDE EPDPSQPSWQ SDSLVDWEPR YVDKFNAFAN KPDVAKVEVY
401: AKGLRSLLKY IKDKYGNPEI MITENGYGED LGEQDTSLVV ALSDQHRTYY IQKHLLSLHE AICDDKVNVT GYFHWSLMDN FEWQDGYKAR FGLYYVDYKN
501: NLTRHEKLSA QWYSSFLHDG SKEFEIEHEF EHDEL
101: IKLMKNLNTD GFRFSIAWPR IFPHGRMEKG ISKAGVQYYH DLIDELLANG ITPLVTVFHW DTPQDLEDEY GGFLSDRIIK DFTEYANFTF QEYGDKVKHW
201: ITFNEPWVFS RAGYDIGNKA PGRCSKYIKE HGEMCHDGRS GHEAYIVSHN MLLAHADAVD AFRKCDKCKG GKIGIAHSPA WFEAHELSDE EHETPVTGLI
301: DFILGWHLHP TTYGDYPQSM KDHIGHRLPK FTEAQKEKLK NSADFVGINY YTSVFALHDE EPDPSQPSWQ SDSLVDWEPR YVDKFNAFAN KPDVAKVEVY
401: AKGLRSLLKY IKDKYGNPEI MITENGYGED LGEQDTSLVV ALSDQHRTYY IQKHLLSLHE AICDDKVNVT GYFHWSLMDN FEWQDGYKAR FGLYYVDYKN
501: NLTRHEKLSA QWYSSFLHDG SKEFEIEHEF EHDEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.