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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, vacuole
Any Predictor:cytosol, nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79758 Canola mitochondrion 94.52 92.08
CDY58095 Canola cytosol, nucleus, vacuole 82.33 86.46
CDX71838 Canola cytosol, nucleus, vacuole 82.16 86.27
CDY47680 Canola endoplasmic reticulum, vacuole 64.66 70.52
CDY47681 Canola mitochondrion 45.23 58.45
CDY69599 Canola cytosol, mitochondrion, vacuole 33.39 54.0
CDY21175 Canola vacuole 46.82 50.86
CDY41625 Canola endoplasmic reticulum, extracellular, vacuole 21.55 50.41
CDY47682 Canola endoplasmic reticulum, vacuole 47.88 50.28
CDX74659 Canola endoplasmic reticulum, vacuole 47.17 50.09
CDY30473 Canola endoplasmic reticulum, vacuole 46.82 49.72
CDY23437 Canola endoplasmic reticulum, vacuole 46.64 49.53
VIT_13s0064g00520.t01 Wine grape endoplasmic reticulum, vacuole 27.74 49.37
CDY37297 Canola cytosol 39.22 48.58
CDY45300 Canola cytosol 39.22 48.58
CDY59555 Canola cytosol 44.7 47.92
CDY53522 Canola cytosol 25.97 47.88
CDY29947 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 46.47 47.82
CDY62094 Canola endoplasmic reticulum 43.82 47.33
KRH29659 Soybean endoplasmic reticulum, plasma membrane, vacuole 43.82 47.33
CDY49904 Canola endoplasmic reticulum 43.82 47.15
CDY44691 Canola endoplasmic reticulum 43.64 47.14
CDY40155 Canola endoplasmic reticulum 43.82 46.97
CDX73966 Canola endoplasmic reticulum 43.46 46.95
CDY52969 Canola endoplasmic reticulum 43.64 46.78
CDY44692 Canola endoplasmic reticulum 43.29 46.76
CDX89050 Canola endoplasmic reticulum, vacuole 47.53 46.54
CDY42667 Canola endoplasmic reticulum, vacuole 47.53 46.54
CDY41624 Canola endoplasmic reticulum 42.93 46.37
CDX74657 Canola endoplasmic reticulum, vacuole 47.7 46.08
CDY13522 Canola endoplasmic reticulum 44.35 45.64
CDY39071 Canola endoplasmic reticulum 44.35 45.64
CDY23438 Canola endoplasmic reticulum, vacuole 65.37 45.34
CDY23436 Canola endoplasmic reticulum, vacuole 46.47 45.11
CDY53521 Canola cytoskeleton, endoplasmic reticulum, vacuole 39.58 44.89
Os08t0509400-01 Rice endoplasmic reticulum, vacuole 39.4 44.6
CDY07912 Canola endoplasmic reticulum 33.57 44.39
CDY47683 Canola endoplasmic reticulum, vacuole 46.11 44.39
CDY30474 Canola cytosol 62.54 44.19
CDX74658 Canola cytosol, endoplasmic reticulum, vacuole 45.94 43.7
CDY21174 Canola cytosol, endoplasmic reticulum, vacuole 20.49 42.49
KRH43441 Soybean endoplasmic reticulum, extracellular, vacuole 31.63 40.77
KRH29658 Soybean endoplasmic reticulum, plasma membrane, vacuole 22.61 40.51
TraesCS2B01G600100.1 Wheat cytosol, mitochondrion, vacuole 30.04 40.0
CDY23576 Canola endoplasmic reticulum, vacuole 26.86 39.9
TraesCS2B01G600000.1 Wheat cytosol, plastid, vacuole 29.86 39.76
CDY00802 Canola endoplasmic reticulum, vacuole 20.67 39.66
Zm00001d041168_P001 Maize plastid 35.87 39.42
KXG23299 Sorghum plastid 34.28 38.72
CDX89146 Canola endoplasmic reticulum, extracellular, vacuole 33.39 37.95
Zm00001d041173_P001 Maize plasma membrane 37.28 37.95
CDY44014 Canola endoplasmic reticulum, vacuole 33.92 37.8
CDX93964 Canola endoplasmic reticulum, extracellular, vacuole 33.22 37.75
EES15867 Sorghum plastid 37.63 37.7
CDX76659 Canola endoplasmic reticulum, plasma membrane, vacuole 33.39 37.65
CDY15268 Canola endoplasmic reticulum, vacuole 33.57 37.55
CDY47163 Canola endoplasmic reticulum, vacuole 34.1 37.4
CDY11445 Canola endoplasmic reticulum, extracellular, vacuole 33.39 37.35
Zm00001d024037_P005 Maize plastid 37.1 37.3
Zm00001d023994_P002 Maize plastid 37.28 37.28
TraesCSU01G036600.1 Wheat plastid 36.93 37.06
Zm00001d024891_P001 Maize plastid 36.22 37.0
CDX77376 Canola endoplasmic reticulum, vacuole 30.74 36.94
Zm00001d041776_P001 Maize extracellular 36.93 36.86
OQU78971 Sorghum plastid 36.4 36.79
CDY52547 Canola cytosol 27.39 36.64
CDX79092 Canola cytosol, nucleus, vacuole 30.39 36.6
CDY55219 Canola endoplasmic reticulum, vacuole 33.39 36.56
CDY71863 Canola cytosol, vacuole 27.21 36.49
TraesCS5B01G418000.1 Wheat plastid 36.22 36.48
CDX83559 Canola endoplasmic reticulum, vacuole 32.86 36.47
CDY11446 Canola endoplasmic reticulum, vacuole 32.51 36.44
TraesCS2B01G599800.1 Wheat extracellular 36.57 36.38
CDY25325 Canola endoplasmic reticulum, vacuole 30.74 36.33
Zm00001d041777_P001 Maize plastid 36.57 36.32
TraesCS2B01G599900.3 Wheat plastid 36.4 36.2
TraesCS2D01G594400.1 Wheat extracellular, plasma membrane 36.4 36.14
CDY15109 Canola endoplasmic reticulum, vacuole 16.25 36.08
TraesCS2B01G600200.1 Wheat plastid 36.4 35.95
CDX76387 Canola vacuole 29.51 35.76
CDY15703 Canola endoplasmic reticulum, vacuole 30.39 35.61
Zm00001d024000_P002 Maize plastid 35.87 35.49
CDY68226 Canola cytosol, vacuole 27.39 35.39
CDY19167 Canola endoplasmic reticulum, vacuole 37.28 35.28
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 31.45 35.25
EES16911 Sorghum cytosol 19.26 35.16
CDX93043 Canola endoplasmic reticulum, vacuole 29.86 34.92
CDY55533 Canola cytosol 31.8 34.82
CDY65784 Canola cytosol, nucleus, vacuole 24.91 34.81
CDY23784 Canola endoplasmic reticulum, vacuole 36.75 34.78
CDX89938 Canola mitochondrion, nucleus, plastid, vacuole 16.43 34.57
CDY39072 Canola cytosol, endoplasmic reticulum, vacuole 23.14 34.56
CDX76660 Canola endoplasmic reticulum, plastid, vacuole 21.91 34.35
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 31.45 34.3
KRH25456 Soybean endoplasmic reticulum, mitochondrion, vacuole 27.92 33.83
CDY12153 Canola endoplasmic reticulum, vacuole 34.1 33.74
CDX94056 Canola vacuole 31.27 33.46
CDX95732 Canola plastid 32.16 33.21
CDY07263 Canola endoplasmic reticulum, vacuole 29.33 32.74
CDX77373 Canola cytosol, endoplasmic reticulum, vacuole 30.74 31.13
CDX98706 Canola cytosol 16.25 31.08
CDY03953 Canola endoplasmic reticulum, vacuole 12.54 30.74
CDY12156 Canola cytosol 8.48 29.27
CDY50402 Canola cytosol 8.48 29.27
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 33.75 27.64
CDX83321 Canola endoplasmic reticulum, golgi, plasma membrane 27.39 25.45
CDX74660 Canola endoplasmic reticulum, vacuole 54.95 24.6
CDY27473 Canola nucleus 28.09 20.44
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078FYF4UniProt:A0A078FYF4EnsemblPlants:CDY17847ProteinID:CDY17847
ProteinID:CDY17847.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00002171001InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CSInterPro:Glycoside_hydrolase_SF
PFAM:PF00232PRINTS:PR00131ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF81SUPFAM:SSF51445
UniParc:UPI0004EE9606:::::
Description
BnaC04g03720DBnaC04g03720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYF4]
Coordinates
chrLK032079:-:25587..28539
Molecular Weight (calculated)
64995.5 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.589
Length
566 amino acids
Sequence
(BLAST)
001: MLNPLWPELE VVMAGTSAEV PLPPDHEARG KKIYAAKNSF GRSNFPEGFL FGTASSAYQY EGAVNDASRG LSVWDTFVRK HPERNCYSHA DQAVEFYHHY
101: KDDIQRMKDI NMDSFRFSIS WPRLLPHGKK SKGVNKEGIK FYNDLIDELL ANGITPLATL FHWDTPQALE DEYNGFLSEK AVDDFRDFAT ICFEEFGDRV
201: KYWVTLNEPW VYSIGGYDTG RKAPGRASNY MNEAALAGES GLEVYTVSHN LLLAHAEAVE VFRNNPKCKD GKIGIAHCPV WFEPYDSNCP DDHEAVERAM
301: EFMFGWHMDP TVYGDYPEVM KRSIGKRLPS FTAAQSQKLK GSFDFVGVNY YSAFYVKNVA DVDHNTPNWR SDACIEWKKQ NKAGEILGPR GGSEWDFLYP
401: QGLRKFLNHA KNKYGSPKFM ITENGHCDID YEKKAKLSNL MDLQRTEYHE KHLQSIHQAI KEDGVQVEGY YAWSLLDNCE WNAGYGVRYG LFYVDYNNGL
501: KRYPKMSAMW FKEFLKKEEI EDSEKEGLML NSVVNKKRKR FLTSSGLPSC YIPKMSESSK ALELFF
Best Arabidopsis Sequence Match ( AT3G60120.1 )
(BLAST)
001: MTQRKNMYSK KNSFGRSDFP EGFLFGTASS AYQYEGARNE APRGESVWDT FVRKYPERNC YSNADQAIEF YNHYKDDIQR MKDINMDAFR FSISWPRIFP
101: LGKKSKGVNK EGIQFYNDLI DELLANGITP LATLFHWDTP QALEDEYSGF LSEEAVDDFK DFAALCFEEF GDRVKLWVTL NEPWVYSIGG YDTGRKAPGR
201: ASKYMNEAAV AGESGLEVYT VSHNLLLAHA EAVEVFRNNP KCKDGKIGIA HCPVWFEPYD SNCPKDIEAC ERAMEFMFGW HMDPTVYGDY PAVMKKSIGK
301: RLPSFTAAQS KKLRGSFDFV GVNYYSAFYV KNIDEVNHDK PNWRSDARIE WRKENNAGQT LGVRGGSEWD FLYPQGLRKF LNYAKNKYES PKFMITENGH
401: CDIDYEKKPK LSNLMDLQRT EYHKKHLQSI QQAIQEDGVV VEGYFAWSLL DNCEWNAGYG VRYGLFYVDY NNGLKRFPKM SAMWFKEFLK REEEIEDSEE
501: EEYVLKSTMN KKRFLLATGS SASCFIPKMS ESSKALELLF
Arabidopsis Description
BGLU27Beta-glucosidase 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1D1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.