Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24064 | Canola | plasma membrane | 98.84 | 90.96 |
| Bra039701.1-P | Field mustard | extracellular, plasma membrane | 81.79 | 88.16 |
| CDY69407 | Canola | extracellular | 51.73 | 71.31 |
| AT5G40990.1 | Thale cress | plasma membrane | 76.3 | 70.59 |
| AT1G53940.2 | Thale cress | plasma membrane | 75.72 | 69.68 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 74.57 | 69.54 |
| CDY02490 | Canola | extracellular, vacuole | 71.1 | 66.31 |
| CDY30674 | Canola | extracellular, vacuole | 68.79 | 63.98 |
| CDY69208 | Canola | mitochondrion | 55.49 | 61.54 |
| CDX97557 | Canola | extracellular | 63.29 | 58.71 |
| CDX98432 | Canola | extracellular | 62.72 | 58.18 |
| CDX98433 | Canola | extracellular, vacuole | 59.83 | 55.35 |
| CDX97558 | Canola | extracellular | 59.83 | 55.35 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 10.4 | 50.7 |
| PGSC0003DMT400016123 | Potato | cytosol | 11.85 | 47.13 |
| CDY71922 | Canola | extracellular, plasma membrane | 29.77 | 46.4 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 47.98 | 45.86 |
| Solyc06g065010.2.1 | Tomato | nucleus | 47.4 | 45.3 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 47.69 | 44.96 |
| Solyc11g051060.1.1 | Tomato | vacuole | 46.53 | 44.72 |
| Solyc11g021040.1.1 | Tomato | extracellular | 26.3 | 43.54 |
| Solyc01g109020.1.1 | Tomato | extracellular | 23.41 | 42.63 |
| Solyc06g064960.2.1 | Tomato | extracellular | 45.09 | 42.62 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 44.51 | 41.96 |
| Solyc06g064990.2.1 | Tomato | extracellular | 45.95 | 41.09 |
| Solyc06g064980.2.1 | Tomato | extracellular | 43.64 | 39.43 |
| PGSC0003DMT400017106 | Potato | extracellular | 41.62 | 38.92 |
| PGSC0003DMT400074599 | Potato | cytosol | 36.13 | 37.76 |
| CDX75755 | Canola | plastid | 44.51 | 35.9 |
| Solyc04g028470.1.1 | Tomato | cytosol | 32.95 | 35.62 |
| CDY25680 | Canola | extracellular, plasma membrane | 16.76 | 34.73 |
| CDY02491 | Canola | plastid | 16.76 | 34.12 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 32.95 | 31.84 |
| Solyc11g051120.1.1 | Tomato | cytosol | 11.56 | 27.59 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 28.61 | 27.42 |
| CDY54197 | Canola | extracellular, vacuole | 30.92 | 27.09 |
| CDY61480 | Canola | extracellular, vacuole | 30.64 | 26.9 |
| CDY08214 | Canola | cytosol | 21.1 | 26.45 |
| CDY33240 | Canola | vacuole | 27.17 | 26.18 |
| CDY30680 | Canola | mitochondrion | 30.35 | 25.99 |
| CDY39106 | Canola | vacuole | 26.3 | 25.35 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 9.54 | 25.19 |
| CDY36628 | Canola | cytosol | 27.75 | 25.07 |
| CDY36625 | Canola | extracellular | 9.83 | 25.0 |
| CDY54192 | Canola | extracellular | 9.54 | 24.63 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 26.88 | 24.16 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 26.88 | 24.16 |
| CDY51412 | Canola | cytosol | 26.59 | 24.02 |
| CDY51410 | Canola | mitochondrion, plastid | 9.54 | 23.57 |
| CDY54591 | Canola | extracellular | 26.3 | 23.51 |
| CDY36623 | Canola | endoplasmic reticulum | 26.01 | 23.5 |
| CDX97555 | Canola | extracellular | 25.72 | 23.06 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 25.72 | 22.94 |
| CDY54588 | Canola | extracellular | 25.43 | 22.8 |
| CDX97556 | Canola | extracellular | 25.43 | 22.68 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.14 | 22.66 |
| CDY54196 | Canola | extracellular | 25.43 | 22.62 |
| CDY30676 | Canola | cytosol | 16.18 | 22.05 |
| CDY54198 | Canola | cytosol | 8.09 | 21.05 |
| CDY54194 | Canola | cytosol | 15.61 | 19.29 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078HFN6 | UniProt:A0A078HFN6 | EnsemblPlants:CDY36617 | ProteinID:CDY36617 |
| ProteinID:CDY36617.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | EnsemblPlantsGene:GSBRNA2T00062331001 | InterPro:IPR036514 |
| InterPro:Lipase_GDSL_AS | PFAM:PF00657 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI0004EC8BA2 | : | : |
Description
BnaC06g06700DBnaC06g06700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFN6]
Coordinates
chrLK032379:+:190354..192005
Molecular Weight (calculated)
38482.1 Da
IEP (calculated)
8.785
GRAVY (calculated)
-0.098
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSRSVSIL FFVHTVVLSI VSINCKDNNN LVTNQAALFV FGDSLFDAGN NNYIDTFSRF KSNIWPYGQT TFKSPTGRIS DGRLIPDFIG GAGALVETFP
101: GMVISLGAQL NNFKNVEKRL RSELGDSEAK RIISRAVYLF HIGGNDYVYP ILFANSSTFQ SISKEKFSDF VFGNITAVIE EAYKVGGRKF GFLNIGAYDC
201: APASLIIDRT KIGSCFKPIT DLINMHNKKL PNVLERLESD LSGFKYALHD YHTSLSERIN NPLKYGFKEG KKACCGTGPL RGINTCGGRV LGLSQGYELC
301: ENVTEYLFFD SFHLMEKAHR QIAKLIWSGP SNVTGPYNLK ALFELK
101: GMVISLGAQL NNFKNVEKRL RSELGDSEAK RIISRAVYLF HIGGNDYVYP ILFANSSTFQ SISKEKFSDF VFGNITAVIE EAYKVGGRKF GFLNIGAYDC
201: APASLIIDRT KIGSCFKPIT DLINMHNKKL PNVLERLESD LSGFKYALHD YHTSLSERIN NPLKYGFKEG KKACCGTGPL RGINTCGGRV LGLSQGYELC
301: ENVTEYLFFD SFHLMEKAHR QIAKLIWSGP SNVTGPYNLK ALFELK
001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
Arabidopsis Description
GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.