Factsheet for Bra039701.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

nucleus 1
extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24064	Canola	plasma membrane	98.44	84.04
CDY36617	Canola	plasma membrane	88.16	81.79
AT5G40990.1	Thale cress	plasma membrane	77.57	66.58
AT1G53940.2	Thale cress	plasma membrane	76.32	65.16
Bra030916.1-P	Field mustard	plastid	72.9	64.46
Bra030917.1-P	Field mustard	extracellular, vacuole	72.27	62.53
Bra014375.1-P	Field mustard	extracellular, vacuole	69.47	59.95
Bra027357.1-P	Field mustard	extracellular	64.49	55.5
Bra027356.1-P	Field mustard	extracellular	62.93	54.01
Solyc01g109020.1.1	Tomato	extracellular	28.35	47.89
Solyc11g021040.1.1	Tomato	extracellular	30.84	47.37
PGSC0003DMT400016123	Potato	cytosol	12.15	44.83
Solyc06g065010.2.1	Tomato	nucleus	50.16	44.48
PGSC0003DMT400080416	Potato	golgi, vacuole	50.16	44.48
Solyc11g051100.1.1	Tomato	cytosol, extracellular	9.66	43.66
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	49.84	43.6
Solyc11g051060.1.1	Tomato	vacuole	48.29	43.06
Solyc06g064960.2.1	Tomato	extracellular	47.35	41.53
PGSC0003DMT400013272	Potato	extracellular, vacuole	47.04	41.14
Solyc06g064990.2.1	Tomato	extracellular	48.29	40.05
PGSC0003DMT400017106	Potato	extracellular	44.24	38.38
PGSC0003DMT400074599	Potato	cytosol	38.94	37.76
Solyc06g064980.2.1	Tomato	extracellular	44.55	37.34
Bra030918.1-P	Field mustard	plastid	35.2	36.33
Solyc04g028470.1.1	Tomato	cytosol	35.51	35.62
Solyc06g064970.2.1	Tomato	extracellular, vacuole	34.89	31.28
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.09	26.14
Bra030911.1-P	Field mustard	extracellular, vacuole	31.46	25.57
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.22	24.94
Bra007962.1-P	Field mustard	extracellular, vacuole	27.41	24.86
Bra037957.1-P	Field mustard	extracellular	28.04	23.5
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	27.41	22.86
Bra021542.1-P	Field mustard	vacuole	25.55	22.84
Bra030915.1-P	Field mustard	extracellular	27.1	22.54
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	26.79	22.45
Bra027359.1-P	Field mustard	extracellular	26.17	22.34
Bra014372.1-P	Field mustard	extracellular	25.86	21.61
Bra027358.1-P	Field mustard	extracellular	25.55	21.13
Bra030912.1-P	Field mustard	extracellular	25.86	18.65
Bra030913.1-P	Field mustard	cytosol	15.26	17.5
Solyc11g051120.1.1	Tomato	cytosol	6.85	15.17

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra039701	EnsemblPlants:Bra039701.1	EnsemblPlants:Bra039701.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016298	GO:GO:0016787
InterPro:IPR036514	InterPro:Lipase_GDSL_AS	UniProt:M4FF29	ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI000253E773	SEG:seg

Description

AT5G40990 (E=6e-082) GLIP1 | GLIP1 (GDSL LIPASE1); carboxylesterase/ lipase

Coordinates

chrA06:-:474068..475749

Molecular Weight (calculated)

35872.6 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.173

Length

321 amino acids

Sequence
(BLAST)

001: MENSRSVSIL FFVHTVVLSI VSINCKDNNN LVTNQAALFV FGDSLFDAGN NNYIDTFSRF KSNIWPYGQT TFKSPTGRIS DGRLIPDFIA EYAWLPLIPP
101: NLQPSNGHNQ FTFGVNFASG GAGALVETFP GMVISLGAQL NNFKNVEKRL RSELGDSEAK RIISRAVYLF HIGGNDYVYP ILFANSSTFK SSSKEKFSDF
201: VLGNITAVIE RLESDLSGFK YALHDYHTSL SERINNRLKY GFKEGKKACC GTGPLRGINT CGGRVWGLSQ RYELCENVTE YLFFDSFHLT EKAHRQIAEL
301: IWSGPSNVTG PYNLKALFEL K

Best Arabidopsis Sequence Match ( AT5G40990.1 )
(BLAST)

001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN

Arabidopsis Description

GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.