Factsheet for Bra030913.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54194	Canola	cytosol	100.0	100.0
Bra037957.1-P	Field mustard	extracellular	73.57	53.79
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	71.43	52.22
AT1G54020.2	Thale cress	endoplasmic reticulum	69.29	52.15
Bra030915.1-P	Field mustard	extracellular	61.07	44.3
Bra014372.1-P	Field mustard	extracellular	60.0	43.75
Bra027359.1-P	Field mustard	extracellular	57.86	43.09
Bra027358.1-P	Field mustard	extracellular	58.93	42.53
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	57.14	41.56
Bra030912.1-P	Field mustard	extracellular	56.43	35.51
Bra021542.1-P	Field mustard	vacuole	38.21	29.8
Solyc11g051100.1.1	Tomato	cytosol, extracellular	6.79	26.76
PGSC0003DMT400016123	Potato	cytosol	7.5	24.14
Bra030911.1-P	Field mustard	extracellular, vacuole	31.43	22.28
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	29.64	21.34
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.0	21.32
KRH06260	Soybean	cytosol, peroxisome	20.36	20.96
VIT_09s0002g00550.t01	Wine grape	extracellular	27.14	20.88
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	27.14	20.77
VIT_09s0002g00570.t01	Wine grape	extracellular	26.07	19.68
KRH13794	Soybean	nucleus	25.36	19.24
Solyc11g051060.1.1	Tomato	vacuole	24.64	19.17
KRH13793	Soybean	nucleus	25.0	18.97
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	24.29	18.53
KRH69020	Soybean	extracellular	22.86	18.29
KRH07083	Soybean	extracellular	17.86	18.18
KRG94370	Soybean	extracellular	23.57	18.08
Bra030917.1-P	Field mustard	extracellular, vacuole	23.93	18.06
Bra027357.1-P	Field mustard	extracellular	23.93	17.96
Solyc06g064960.2.1	Tomato	extracellular	23.21	17.76
KRH47690	Soybean	extracellular, vacuole	23.21	17.76
Solyc06g065010.2.1	Tomato	nucleus	22.86	17.68
Bra014375.1-P	Field mustard	extracellular, vacuole	23.21	17.47
Bra030916.1-P	Field mustard	plastid	22.5	17.36
PGSC0003DMT400017106	Potato	extracellular	22.86	17.3
Solyc04g028470.1.1	Tomato	cytosol	19.64	17.19
Bra027356.1-P	Field mustard	extracellular	22.86	17.11
Solyc06g064980.2.1	Tomato	extracellular	23.21	16.97
PGSC0003DMT400013272	Potato	extracellular, vacuole	22.14	16.89
Solyc06g064990.2.1	Tomato	extracellular	23.21	16.8
KRG97292	Soybean	extracellular	21.43	16.39
PGSC0003DMT400074599	Potato	cytosol	19.29	16.31
PGSC0003DMT400080416	Potato	golgi, vacuole	21.07	16.3
Bra039701.1-P	Field mustard	extracellular, plasma membrane	17.5	15.26
Bra007962.1-P	Field mustard	extracellular, vacuole	19.29	15.25
Solyc11g051120.1.1	Tomato	cytosol	7.86	15.17
Bra030918.1-P	Field mustard	plastid	15.36	13.83
Solyc06g064970.2.1	Tomato	extracellular, vacuole	17.5	13.69
Solyc01g109020.1.1	Tomato	extracellular	6.07	8.95
Solyc11g021040.1.1	Tomato	extracellular	6.07	8.13
KRG97291	Soybean	extracellular	1.43	3.81

Protein Annotations

EnsemblPlants:Bra030913.1	EnsemblPlants:Bra030913.1-P	EnsemblPlantsGene:Bra030913	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF331	PFAM:PF00657	UniParc:UPI0002545620	UniProt:M4EQ42	MapMan:35.1	:

Description

AT1G54020 (E=3e-112) | myrosinase-associated protein, putative

Coordinates

chrA08:+:743900..745102

Molecular Weight (calculated)

32159.3 Da

IEP (calculated)

8.183

GRAVY (calculated)

-0.371

Length

280 amino acids

Sequence
(BLAST)

001: MGIPHDLPPA LKPGADVSRV ASFAVDYAFI LGNGTRTPKN SMISNWKEDD IPKSLFMIST GMEDYYNFTK TYPDADASAQ QAYVISVINR LKYNLELLYS
101: SRSSKFVVHN VALLGCLPIV RQEFNTGYEC YEKFNGLAKK HNARLGPMLN KLAKAKSGFQ FTLFDFYNVL LRRTQRNMNY RFSFTNISYC GIGSHNAHGC
201: GLPNVHSKLC EYQRYYLYFD ARDDTEKAQE SFAHLLSGAD PNVLQPMNIR QLITYPVNDD MSEFWKEPVE EREFIVRPWL

Best Arabidopsis Sequence Match ( AT1G54020.4 )
(BLAST)

001: MISNWKVDYI QKSVFMISIG MEDYYNFTKN NPNAEVSAQQ AFVTSVTNRF KSDINLLYSS GASKFVVHLL APLGCLPIAR QEFKTGNNCY EKLNDLAKQH
101: NAKIGPILNE MAETKPDFQF TVFDFYNVIL RRTQRNMNYR FSVTNISCCG VGTHYAYGCG LPNVHSKLCE YQRSYLYFDA RHNTEKAQEA FAHLIFGADP
201: NVIQPMNVRE LMVYPVNEPM REFWEDPMDE KLSLVQY

Arabidopsis Description

GDSL esterase/lipase At1g54020 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5N8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.