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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000640.1-P
Bra001320.1-P
Bra001631.1-P
Bra001786.1-P
Bra001787.1-P
Bra003836.1-P
Bra003837.1-P
Bra003839.1-P
Bra014372.1-P
Bra014374.1-P
Bra015981.1-P
Bra018969.1-P
Bra023886.1-P
Bra026178.1-P
Bra027359.1-P
Bra030386.1-P
Bra030912.1-P
Bra030913.1-P
Bra030915.1-P
Bra032150.1-P
Bra034060.1-P
Bra035787.1-P
Bra037954.1-P
Bra037957.1-P
Bra040903.1-P
Bra040904.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54030.1 Bra018969.1-P AT1G52400.1 23155454
AT1G54030.1 Bra030386.1-P AT1G52400.1 23155454
AT1G54030.1 Bra014372.1-P AT1G54000.1 23155454
AT1G54030.1 Bra014374.1-P AT1G54000.1 23155454
AT1G54030.1 Bra030912.1-P AT1G54000.1 23155454
AT1G54030.1 Bra030915.1-P AT1G54000.1 23155454
AT1G54030.1 Bra014372.1-P AT1G54010.1 23155454
AT1G54030.1 Bra014374.1-P AT1G54010.1 23155454
AT1G54030.1 Bra030912.1-P AT1G54010.1 23155454
AT1G54030.1 Bra030915.1-P AT1G54010.1 23155454
AT1G54030.1 Bra030913.1-P AT1G54020.2 23155454
AT1G54030.1 Bra037954.1-P AT1G54020.2 23155454
AT1G54030.1 Bra037957.1-P AT1G54020.2 23155454
AT1G54030.1 Bra003836.1-P AT1G58270.1 23155454
AT1G54030.1 Bra003837.1-P AT1G58270.1 23155454
AT1G54030.1 Bra003839.1-P AT1G58270.1 23155454
AT1G54030.1 Bra015981.1-P AT1G58270.1 23155454
AT1G54030.1 Bra001320.1-P AT3G09260.1 23155454
AT1G54030.1 Bra034060.1-P AT3G09260.1 23155454
AT1G54030.1 Bra027359.1-P AT3G14210.1 23155454
AT1G54030.1 Bra001631.1-P AT3G16420.1 23155454
AT1G54030.1 Bra000640.1-P AT3G20370.1 23155454
AT1G54030.1 Bra001786.1-P AT3G20370.1 23155454
AT1G54030.1 Bra001787.1-P AT3G20370.1 23155454
AT1G54030.1 Bra032150.1-P AT3G20370.1 23155454
AT1G54030.1 Bra035787.1-P AT3G20370.1 23155454
AT1G54030.1 Bra040903.1-P AT3G20370.1 23155454
AT1G54030.1 Bra040904.1-P AT3G20370.1 23155454
AT1G54030.1 Bra023886.1-P AT3G21370.1 23155454
AT1G54030.1 Bra026178.1-P AT3G21370.1 23155454
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08214 Canola cytosol 70.69 99.64
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 86.38 85.28
Bra030911.1-P Field mustard extracellular, vacuole 86.12 84.81
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 81.75 76.26
Bra030915.1-P Field mustard extracellular 37.79 38.08
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 37.53 37.92
Bra021542.1-P Field mustard vacuole 34.96 37.88
Bra014372.1-P Field mustard extracellular 36.25 36.72
PGSC0003DMT400016123 Potato cytosol 7.97 35.63
Bra027359.1-P Field mustard extracellular 33.68 34.84
Bra027358.1-P Field mustard extracellular 34.45 34.54
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 31.88 33.88
VIT_09s0002g00550.t01 Wine grape extracellular 31.36 33.52
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 32.65 33.16
Bra037957.1-P Field mustard extracellular 32.65 33.16
Bra030916.1-P Field mustard plastid 29.31 31.41
Bra030912.1-P Field mustard extracellular 35.48 31.01
Bra014375.1-P Field mustard extracellular, vacuole 29.56 30.91
KRH13794 Soybean nucleus 29.31 30.89
KRH47690 Soybean extracellular, vacuole 29.05 30.87
KRH69020 Soybean extracellular 27.76 30.86
Bra027357.1-P Field mustard extracellular 29.56 30.83
Solyc11g051060.1.1 Tomato vacuole 28.28 30.56
VIT_09s0002g00570.t01 Wine grape extracellular 29.05 30.46
Bra030917.1-P Field mustard extracellular, vacuole 29.05 30.46
Bra039701.1-P Field mustard extracellular, plasma membrane 24.94 30.22
KRH13793 Soybean nucleus 28.53 30.08
PGSC0003DMT400016126 Potato plasma membrane, vacuole 28.28 29.97
KRG94370 Soybean extracellular 28.02 29.86
Bra030913.1-P Field mustard cytosol 21.34 29.64
Solyc11g051100.1.1 Tomato cytosol, extracellular 5.4 29.58
PGSC0003DMT400013272 Potato extracellular, vacuole 27.25 28.88
Solyc04g028470.1.1 Tomato cytosol 23.65 28.75
PGSC0003DMT400074599 Potato cytosol 24.42 28.7
KRG97291 Soybean extracellular 7.71 28.57
PGSC0003DMT400080416 Potato golgi, vacuole 26.48 28.45
Solyc06g064990.2.1 Tomato extracellular 28.28 28.42
Solyc06g064960.2.1 Tomato extracellular 26.74 28.42
KRG97292 Soybean extracellular 26.48 28.14
KRH07083 Soybean extracellular 19.79 28.0
Solyc06g064980.2.1 Tomato extracellular 27.51 27.94
Solyc06g065010.2.1 Tomato nucleus 25.96 27.9
PGSC0003DMT400017106 Potato extracellular 26.48 27.84
Bra027356.1-P Field mustard extracellular 26.74 27.81
Solyc01g109020.1.1 Tomato extracellular 12.85 26.32
Bra030918.1-P Field mustard plastid 20.82 26.05
KRH06260 Soybean cytosol, peroxisome 17.74 25.37
Solyc11g021040.1.1 Tomato extracellular 13.11 24.4
Solyc06g064970.2.1 Tomato extracellular, vacuole 21.85 23.74
Bra007962.1-P Field mustard extracellular, vacuole 21.08 23.16
Solyc11g051120.1.1 Tomato cytosol 8.48 22.76
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EnsemblPlantsGene:Bra014371EnsemblPlants:Bra014371.1EnsemblPlants:Bra014371.1-PInterPro:GDSL
GO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788InterPro:IPR036514UniProt:M4DD04
PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF461InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00025459D5SEG:seg:::
Description
AT1G54030 (E=1e-171) | GDSL-motif lipase, putative
Coordinates
chrA08:+:1343844..1349059
Molecular Weight (calculated)
42831.1 Da
IEP (calculated)
5.979
GRAVY (calculated)
-0.101
Length
389 amino acids
Sequence
(BLAST)
001: MANPKSHLFA LLLLHFSTVS LAQTLFVFGD GLYDAGNKQF VSSNRVDASF PPYGITLGEA TGRWSDGRIV PDYLASFMGI SQIPPILRAT ADFSHGANFA
101: IADATVLGAP PESMTLSQQV IKFSENKNKW TAKARSEAIY LFYIASDDCL NYAKNNPNPS DDQKQAFVGR VIAAIEAELK VLYGSGGRKF AFQNLAPLGC
201: LPSVKQANGN VQECARLPSE MAELHNKKLL QLLVELSRQL SGFQYSFYDF FSSIQNRVIK SKTYTFETGM AACCGTGSVN GTSCSTSNVC AKPEDYLFFD
301: GKHLTQEGNL QVGHLIWGSD PEVVGPNNLR ELLFLPLDIT ATLANIQEAM AATMPRQIKI ESLYDIKKME SEMENQWLYQ VDKATSFLI
Best Arabidopsis Sequence Match ( AT1G54030.1 )
(BLAST)
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [nucleus,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.