Factsheet for Bra014375.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 1
extracellular 6
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30674	Canola	extracellular, vacuole	98.12	98.12
Bra030917.1-P	Field mustard	extracellular, vacuole	77.42	77.63
Bra030916.1-P	Field mustard	plastid	74.73	76.58
AT1G53990.1	Thale cress	extracellular, plasma membrane	71.51	72.48
Bra039701.1-P	Field mustard	extracellular, plasma membrane	59.95	69.47
Bra027357.1-P	Field mustard	extracellular	59.95	59.79
Bra027356.1-P	Field mustard	extracellular	58.33	58.02
PGSC0003DMT400080416	Potato	golgi, vacuole	46.77	48.07
Solyc11g021040.1.1	Tomato	extracellular	26.88	47.85
Solyc06g065010.2.1	Tomato	nucleus	46.24	47.51
Solyc01g109020.1.1	Tomato	extracellular	24.19	47.37
Solyc11g051060.1.1	Tomato	vacuole	45.43	46.94
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	46.24	46.87
Solyc06g064990.2.1	Tomato	extracellular	46.24	44.44
Solyc06g064960.2.1	Tomato	extracellular	43.55	44.26
Bra030918.1-P	Field mustard	plastid	36.56	43.73
PGSC0003DMT400013272	Potato	extracellular, vacuole	42.74	43.32
Solyc06g064980.2.1	Tomato	extracellular	43.55	42.3
Solyc11g051100.1.1	Tomato	cytosol, extracellular	8.06	42.25
PGSC0003DMT400016123	Potato	cytosol	9.68	41.38
PGSC0003DMT400074599	Potato	cytosol	36.02	40.48
PGSC0003DMT400017106	Potato	extracellular	39.52	39.73
Solyc04g028470.1.1	Tomato	cytosol	33.33	38.75
Solyc06g064970.2.1	Tomato	extracellular, vacuole	34.14	35.47
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.53	30.71
Bra030911.1-P	Field mustard	extracellular, vacuole	31.72	29.87
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.91	29.56
Bra007962.1-P	Field mustard	extracellular, vacuole	26.34	27.68
Bra030915.1-P	Field mustard	extracellular	27.42	26.42
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	27.15	26.23
Bra021542.1-P	Field mustard	vacuole	25.27	26.18
Bra037957.1-P	Field mustard	extracellular	26.61	25.85
Solyc11g051120.1.1	Tomato	cytosol	9.68	24.83
Bra014372.1-P	Field mustard	extracellular	25.54	24.74
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	25.27	24.54
Bra027358.1-P	Field mustard	extracellular	25.27	24.23
Bra027359.1-P	Field mustard	extracellular	24.46	24.2
Bra030913.1-P	Field mustard	cytosol	17.47	23.21
Bra030912.1-P	Field mustard	extracellular	25.81	21.57

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra014375	EnsemblPlants:Bra014375.1	EnsemblPlants:Bra014375.1-P	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	UniProt:M4DD08
PFAM:PF00657	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266
SignalP:SignalP-noTM	UniParc:UPI00025459D1	SEG:seg	:	:	:

Description

AT1G53990 (E=5e-145) GLIP3 | GLIP3; carboxylesterase/ lipase

Coordinates

chrA08:+:1305656..1307667

Molecular Weight (calculated)

41189.3 Da

IEP (calculated)

8.990

GRAVY (calculated)

-0.119

Length

372 amino acids

Sequence
(BLAST)

001: MEKCRLVSII LFVHTIILSI SSINCTENNG KLVTNQAALF VFGDSLFDPG NNNYINITNR ANFFPYGQTF FKFPTGRVSD GRLIPDFIAE KAWLPLIPPN
101: LQPRNSNSQF TYGVSFASAG AGALVESFSG QVIDLGTQLK SFKTVKRRVR SALGEAETKR IFSRAVYLFN IGGNDLFYAL FQTSSLVNLN AKQKLVDLII
201: GNTTSVVEEV YKMGGRKFGF LNVGAYDCAP AASILDTANI GSCNKPVTEL IDLHNKKFPD GLRRLQRELS GFKYALHDYR TSLLDRINNP SKYGFKEGNK
301: ACCGSGPLRG MPTCGINQTG LSYELCEDVT NYLFFDSAHL TEKAHRQFAE LIWSGPPNVT GPYNLKALFE LN

Best Arabidopsis Sequence Match ( AT1G53990.1 )
(BLAST)

001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT

Arabidopsis Description

GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.