Factsheet for Bra007962.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	35.03	94.66
AT1G71120.1	Thale cress	endoplasmic reticulum	87.01	85.08
VIT_01s0011g04540.t01	Wine grape	extracellular	66.95	66.02
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	66.1	64.11
PGSC0003DMT400096676	Potato	mitochondrion	60.17	50.47
Bra027356.1-P	Field mustard	extracellular	30.23	28.61
Bra030917.1-P	Field mustard	extracellular, vacuole	28.81	27.49
Bra039701.1-P	Field mustard	extracellular, plasma membrane	24.86	27.41
Bra030918.1-P	Field mustard	plastid	23.73	27.01
Bra027357.1-P	Field mustard	extracellular	27.97	26.54
Bra014375.1-P	Field mustard	extracellular, vacuole	27.68	26.34
Bra030916.1-P	Field mustard	plastid	26.84	26.17
Bra037957.1-P	Field mustard	extracellular	27.68	25.59
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	27.68	25.45
Bra027359.1-P	Field mustard	extracellular	26.84	25.27
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	26.84	24.8
Bra021542.1-P	Field mustard	vacuole	24.86	24.51
Bra014372.1-P	Field mustard	extracellular	26.55	24.48
Bra030915.1-P	Field mustard	extracellular	26.27	24.09
Bra027358.1-P	Field mustard	extracellular	26.27	23.97
Bra030911.1-P	Field mustard	extracellular, vacuole	25.71	23.04
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	24.01	21.57
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	23.16	21.08
Bra030912.1-P	Field mustard	extracellular	25.99	20.67
Bra030913.1-P	Field mustard	cytosol	15.25	19.29

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra007962	EnsemblPlants:Bra007962.1	EnsemblPlants:Bra007962.1-P	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016298
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	UniProt:M4CUR7	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF187	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0002546C2C
SEG:seg	:	:	:	:	:

Description

AT1G71120 (E=3e-155) GLIP6 | GLIP6; carboxylesterase/ lipase

Coordinates

chrA02:-:12143492..12144887

Molecular Weight (calculated)

39476.5 Da

IEP (calculated)

8.808

GRAVY (calculated)

-0.083

Length

354 amino acids

Sequence
(BLAST)

001: MSSMDLLVTL LLLASPVALA KSSPSLPAIF TFGDSIFDAG NNHFNKNCTA QADFPPYGSS FFHQPTGRFT NGRTVADFIS QFIGLPLQKS FLELQIQILN
101: RTLKRFPSNG INFASAGSGF LLDTNKDMRV TPIQTQLQQF QTLVEQNKIE KSVIQESLFL LESGSNDIFN YFLPFQTTTL SPDDYVDSML TQVNKTIDQI
201: YKLGARRIAI FSLGPVGCVP ARALLPNAPT NKCFGKMNVM AKKYNRRLED IVNIIPTNYP GAIAVFGAVF QTYPARYGFS DVLNACCGGG TLGGLKQCGR
301: EGYKICNNPN EFMFWDFYHP TERTYHLMSK ALWNGNENKI RPFNLMALAT NFTF

Best Arabidopsis Sequence Match ( AT1G71120.1 )
(BLAST)

001: MSSSSSMDLL MCLLLLISPV VLAKSSSTVP AIFTFGDSIF DAGNNHYNKN CTAQADFPPY GSSFFHRPTG RFTNGRTVAD FISEFVGLPL QKPFLELQIQ
101: ILNGTSNFSN GINFASAGSG LLLDTNKFMG VTPIQTQLQQ FQTLVEQNLI EKSIIQESLF LLETGSNDIF NYFLPFRAPT LSPDAYVNAM LDQVNKTIDQ
201: IYKLGARRIA FFSLGPVGCV PARAMLPNAP TNKCFGKMNV MAKMYNKRLE DIVNIIPTKY PGAIAVFGAV YGITHRFQTY PARYGFSDVS NACCGNGTLG
301: GLMQCGREGY KICNNPNEFL FWDFYHPTEH TYRLMSKALW NGNKNHIRPF NLMALATNKI TF

Arabidopsis Description

GLIP6GLIP6 [Source:UniProtKB/TrEMBL;Acc:A0A178WCW6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.